Buchnera aphidicola (Aphis glycines): IX46_02575
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Entry
IX46_02575 CDS
T04764
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
baph
Buchnera aphidicola (Aphis glycines)
Pathway
baph03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
baph00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IX46_02575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baph03021
]
IX46_02575
03400 DNA repair and recombination proteins [BR:
baph03400
]
IX46_02575
Enzymes [BR:
baph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IX46_02575
Transcription machinery [BR:
baph03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IX46_02575
DNA repair and recombination proteins [BR:
baph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IX46_02575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ALD15423
UniProt:
A0A0M4HEJ4
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All DBs
Position
complement(537012..538001)
Genome browser
AA seq
329 aa
AA seq
DB search
MQRSIMGFLKPRLVDIEQITSTHTKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IEGVLHEYSTKEGIQEDILEILLNLKGLAIKLHGKDETFVSLQKTGVCCVTASDIIHDND
VEIIKPNHVICHLTDDNASIQMRIKVQRGRGYIPASSRVHIEDESRPIGCLLVDACYSPI
NRIVYNVEAARVEQRTDLDKLIIEMKTNGTIDPEEAIRRAATILSEQLEAFVDLRDVKEP
EVREEKPEFEPILLRPVDDLELTVRSANCLKAESIHYIGDLVQKTEVELLKTPNLGKKSL
TEIKDILASRNLSLGMKLEKWPPLNILEE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttctattatgggatttttgaagccacgtttagttgatattgaacaaattacc
tccactcatacaaaagttacattagaaccgttagagcgaggttttggtcatacactaggt
aatgcattgcgaagaattttactatcttctatgcctggttgcgctgtaacagaggtagag
attgaaggcgttttacatgaatacagtacaaaagaaggaattcaagaagatattttagaa
attttacttaatttaaaaggattagctattaagttacatggaaaagatgaaacatttgtt
agccttcaaaaaacaggtgtatgctgtgttactgcatccgatattatacatgataatgat
gttgagatcatcaaacctaatcatgtaatttgtcatttgacagatgataatgcttctatt
cagatgagaattaaagtacaacgtggcagaggttatataccagcttcatctcgagtacat
atagaagatgaatcaagaccaattggttgtctattagtagatgcatgttatagtcctatc
aatcggattgtgtataacgttgaagctgcacgagttgaacaaagaacagatttagataag
ttaattattgagatgaaaacaaatggaacaattgatcctgaagaagccataagacgtgca
gcaactattttatcagaacagttagaagcttttgttgatttaagagatgtgaaagaaccg
gaagtacgagaagaaaaacctgaatttgaacctattttattacgccctgtagatgactta
gaattaactgtacgatcagctaattgtcttaaagcagaatctatacattatataggggat
ttagttcaaaaaaccgaagttgaacttttaaaaacacctaatttagggaaaaaatcgtta
actgaaattaaagatatattagcttcacgtaatttatcacttggcatgaaattagagaaa
tggcccccattgaatattttagaagaataa
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