Buchnera aphidicola (Aphis glycines): IX46_03080
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Entry
IX46_03080 CDS
T04764
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
baph
Buchnera aphidicola (Aphis glycines)
Pathway
baph03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IX46_03080 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baph03021
]
IX46_03080 (rho)
03019 Messenger RNA biogenesis [BR:
baph03019
]
IX46_03080 (rho)
Transcription machinery [BR:
baph03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
IX46_03080 (rho)
Messenger RNA biogenesis [BR:
baph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IX46_03080 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
AAA_25
AAA_22
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ALD15513
UniProt:
A0A0M4H3Z4
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All DBs
Position
complement(613672..614931)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTALKNMPVSELIILGEKMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTILLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELPLSRKIAEKRVFPAIDY
NRSGTRKEELLTLPDELQKMWILRKIIHPMSEIDAMEFLLNKLSMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgcacttaaaaatatgccagtttccgaattaattattcttggtgaaaaa
atggggttggaaaatttagcgcgtatgcgtaaacaagatattatttttgcaatccttaaa
caacacgcaaaaagtggagaagatatatttggagatggagttttagaaatattacaagat
ggatttggatttcttcgttcctctgatagttcttatttagctggtcctgatgatatatat
gtatcacctagtcaaattcgtaggtttaatttaagaactggtgatactatttctgggaaa
atacgaccacctaaagagggtgagagatattttgctttattaaaagttaatgaagttaat
tatgataaaccggaaaatgcaagaagtaaaattttatttgaaaacttaacacctttgcat
gctaattctcgcttgagaatggaaagaggaaatggttcaacagaagatttaactgcaaga
gttttagatttagcttcacccataggaagaggtcaaagaggtttaattgtagcacctccg
aaagcaggtaaaacaatattacttcaaaatattgcacaaagcatagcttataatcatcca
gattgtgttttaatggtattattaattgatgaaagaccagaagaagttactgaaatgcaa
agattagtaaaaggagaagttgttgcttctacttttgatgaacctgcatcaagacatgta
caagtagcagaaatggtcattgaaaaggctaaaagattagtagagcataaaaaagatgta
attatattactcgactctattactcgtctagcacgtgcttataatactgttgtaccagct
tcaggaaaagttttaacaggaggagtggatgctaatgcattacatagacctaaaagattt
tttggtgctgctcgtaatgtagaagaaggtgggagtttaacgataattgccaccgcatta
gttgatacaggttcaaaaatggatgaagttatttatgaagagttcaaaggaacaggtaat
atggaattaccattatccagaaaaatagcagaaaaacgcgtttttccagctattgattat
aatagatctggaacaagaaaagaagaattattaactttaccagatgaacttcaaaaaatg
tggatattaagaaaaattattcacccaatgagtgaaatagatgcgatggagtttttatta
aataaattatctatgactaaaactaatgacgaattttttgacatgatgaaacgctcttaa
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