Ditibartonella choladocola: BBC0122_002730
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Entry
BBC0122_002730 CDS
T05086
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
bapi
Ditibartonella choladocola
Pathway
bapi03030
DNA replication
bapi03430
Mismatch repair
bapi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bapi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBC0122_002730
03430 Mismatch repair
BBC0122_002730
03440 Homologous recombination
BBC0122_002730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bapi03032
]
BBC0122_002730
03400 DNA repair and recombination proteins [BR:
bapi03400
]
BBC0122_002730
Enzymes [BR:
bapi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBC0122_002730
DNA replication proteins [BR:
bapi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBC0122_002730
DNA repair and recombination proteins [BR:
bapi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBC0122_002730
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
DUF7908
Motif
Other DBs
NCBI-ProteinID:
AQT46411
UniProt:
A0A1U9MFH2
LinkDB
All DBs
Position
312115..313233
Genome browser
AA seq
372 aa
AA seq
DB search
MRITVDRSHLLKSLGRVHRVVERRNTIPILSNVLINAVNSGVELQATDLDLEVTETTAAN
IEQSGSTTVPAHLLYEIVRKLPEGGEIMLSVADDGNAMLVVSGRSNFRLQCLPKEDFPEL
NAGDFSHSFTLAASALKRLIDCTQFAISTEETRYYLNGIYFHVIDDKGLKLRTVATDGHR
LAEAETDAPSGSEGMPGVIIPRKAVGELQKLLGEEAESEIKIEVSETKIRFSIASVVLTS
KLIDGTFPDYQRVIPLGNDKKLTINRQSFAASVDRVSTISSDRGRAVKLTIENGQLTLTV
NNPDSGSAEDQIVADYEGEPLEIGFNSKYLLDIMAQLNGENAVFMLADSGAPTLIRDGED
ANALYVLMPMRV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcacagtcgatcgtagccatctgttaaaatctctcggtcgagtacatcgtgtc
gtcgaaagacgaaatacgattcctattctgtcgaatgtcctgattaacgcagtcaattcc
ggagttgaattgcaggcgaccgatcttgatcttgaagtgacagaaacgactgcagccaat
attgaacagtcaggttcgacaacggttccggctcatcttctttacgaaattgtccgcaaa
cttcccgaaggtggcgagataatgctttcggtcgcagatgacggaaatgccatgctggtt
gtttccggccggtcgaatttccggttgcaatgtttgcccaaggaagattttcccgaactc
aatgccggtgacttcagccatagttttacattggcggcatccgcattgaagcgactcatt
gattgcacccaatttgctatttcaaccgaagaaacgcgctattatctcaatggtatctat
ttccatgtgatagatgataaagggttaaaactgcgcacagttgcaacggacggtcaccgt
ctggccgaagccgaaaccgatgcaccatccggttctgaaggaatgccgggtgttatcatt
ccccgaaaagccgttggcgagttgcaaaagctgttgggggaagaagccgaaagcgaaata
aaaatagaagtttcggaaacgaaaatacgtttcagcattgcttctgttgtgctgacctcg
aaattgatcgacggcacatttcctgattatcaacgtgttattcccttgggtaatgacaag
aaactcactattaaccgtcaaagctttgctgcatcggtcgatcgcgtttcgactatttcg
agtgatcgcgggcgggctgtcaaattgacaatcgaaaatggtcaattaacactcacagtc
aacaatcctgattccggcagtgcggaagaccagatcgtcgccgattatgaaggcgaacct
ttggaaatcggtttcaattcaaaatatcttcttgatattatggcacaactcaacggtgaa
aatgcggtcttcatgctcgccgattccggggcgccgacgctcattcgggatggtgaagat
gcgaatgcactttatgttttgatgccgatgcgtgtatag
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