| Entry |
|
|---|
| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
|
|---|
| KO |
|
|---|
| Organism |
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:bapi00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BBC0122_009720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:bapi03021]
BBC0122_009720
03400 DNA repair and recombination proteins [BR:bapi03400]
BBC0122_009720
Enzymes [BR:bapi01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BBC0122_009720
Transcription machinery [BR:bapi03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BBC0122_009720
DNA repair and recombination proteins [BR:bapi03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BBC0122_009720
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
1114530..1118738
|
|---|
| AA seq |
1402 aa
MNQEVMNLFNPQAPTQTFDSIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGTLLDMTLKDIERVLYFENYIVTEPGLTSLKMHQLLSEEEYMMAVDEFGPDQFTA
LIGAEAIYELLAAMDLQKIAADLRAELAETTSDLKIKKLMKRLKIVENFIESGNRPEWMI
MKVIPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIVRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGFSSTVKQAKKLVEKERPEVWDILEEVIRE
HPVLLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGAPIIVPSQDMVLGLYYLSIVCEHEPGEGMAFGDMGELQHALD
SKVVTLHTKIKGRVKSVDADGNIVSKIYDTTPGRLIIGETLPKNPNIKFDIVNQEMTKKN
ISKMIDHVYRHCGQKETVMFCDRIMSLGFANACRAGISFGKDDMVIPESKARLVQETEAL
AKEYEQQYNDGLITQGEKYNKVVDAWGKCTDRVADEMMKRIQAVEFDPVTGRQKPMNSIY
MMSHSGARGSPNQMKQLGGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDAIISEVDCGTDKGLTMQAIVDAGQVVASLGQRILGRT
ALHDIIHPTTGEVIVEGGRMIEEADVAKIEAAGIQSVQIRSALTCETRVGVCAKCYGRDL
ARGTPVNQGEAVGVIAAQSIGEPGTQLTMRTFHLGGTAQVVDTSYLEASYEGKVELRNRK
VVRNSEGHLVVMGRNMAILIKDENGKERASHRITYGARIFVDDGDVVKRGQRIAEWDPYT
RPIMTEVEGYVGFEDMLDGLSVTETTDESTGITKRQVIDWRANPRGAELKPAIVIYADKK
GSKIAKLSKGGDARYMMSVETILSVEPGAHVKAGDVIGRLPMESAKTKDITGGLPRVAEL
FEARRPKDHAIIAEIDGTIRFGRDYKNKRRITIEPNDDTVEPVEYLIPKGKPFHLQDGDQ
IEKGDYILDGNPAPHDILAIKGVEALASYLVNEIQSVYRLQGVVINDKHIEVIVRQMLQK
VEITDSGDSGYIPGDNVDRIELQEVNDRLIEEGKKPASGNPVLLGITKASLQTPSFISAA
SFQETTRVLTEAAVAGKMDTLQGLKENVIVGRLIPAGTGGTIAQIRRIATARDDLIVDEH
RKANGGDKANAMLSDMTHTAAE |
|---|
| NT seq |
4209 nt +upstreamnt +downstreamnt
atgaaccaagaggtcatgaatcttttcaatcctcaggcgcctacacagacgtttgattcc
atcaggatatcaatcgccagccctgagaagattctgtcctggtcttatggcgaaatcaaa
aagcctgagaccattaactaccgtacgttcaagccagagcgtgacgggcttttctgcgca
cgtattttcgggccgatcaaagattatgaatgtctatgcggcaaatacaagcgcatgaag
tataaaggcattatttgcgaaaaatgcggcgttgaagtaactctttcacgtgttcgccgc
gagcgtatggggcatatcgaacttgctgctccagtcgcacatatatggtttttgaaatca
ctgccgagccgtatcggtacacttcttgatatgactctcaaggatatcgagcgtgttctt
tatttcgagaactacattgtaaccgaacccggattgacttcgctcaaaatgcatcagctt
ctttccgaagaagaatatatgatggcggttgacgaattcgggccggaccagtttaccgct
ttgatcggtgcagaagcgatctatgagctgctcgcagcaatggatttgcagaaaatagct
gccgatctgcgtgcggaactcgcagagacgacatcggatttgaaaatcaagaaattgatg
aaacgtctgaaaatcgtcgagaattttatcgagtccggaaatcgtccggaatggatgatt
atgaaggttattccggttattcctccggatttacgcccgttggttccgcttgatggtggc
cgttttgcgacatccgaccttaacgacctctatcgtcgcgttatcaaccgtaacaaccgt
ttgaaacgtttgatcgaacttcgcgcacccggcattatcgtacgcaatgaaaagcgtatg
ttgcaggaagccgtcgatgctctgttcgataatggtcgtcgtggacgtgtcattaccggt
gccaataagcggccgctgaaatcgctttcggatatgctgaaaggcaagcagggacgtttc
cgtcaaaacctgcttggtaagcgcgtcgattattccggtcgttcggttatcgttacaggt
cctgaactgaagttgcatcaatgcggcttgccgaaaaaaatggctttggaactgttcaag
ccgtttatttacgcacgcctcgacgcaaagggtttttcgtcaaccgtaaaacaagccaag
aagctcgttgaaaaagaacgtcctgaagtttgggatattctcgaagaggttatccgtgaa
caccccgttcttttgaaccgcgctccgaccttgcaccgtttgggtattcaggcttttgaa
ccgaccttgattgaaggtaaggcaatccagcttcatccgctggtttgtaccgctttcaac
gcggatttcgatggcgaccaaatggctgtccacgtaccgctgtcgcttgaagcccagctt
gaagcccgcgtcctgatgatgtcgaccaacaatattctgcatcctgccaatggcgcgccg
attattgttccctcgcaagatatggtgctcggcctttattacctgtcgattgtttgcgaa
catgaaccgggtgagggcatggcgtttggtgatatgggtgaattgcaacatgcgttggat
agcaaagttgtaacgcttcacacaaagatcaaaggccgcgttaaaagtgttgacgccgat
ggcaatatcgtctcgaaaatttacgacacaacaccgggacggcttatcatcggtgaaaca
ttgccgaaaaatccgaacatcaagttcgatatcgtcaatcaggaaatgaccaaaaagaac
atttccaagatgatcgaccatgtttaccgtcactgcgggcaaaaagaaacagtgatgttc
tgcgaccgcatcatgtcactcggttttgccaatgcttgccgtgccggcatttcgttcggt
aaggacgatatggttataccggaaagcaaggcaagactggttcaggaaaccgaggctttg
gccaaggaatatgaacagcaatataatgacggtcttattacacagggcgaaaagtacaac
aaggttgtcgacgcttggggtaaatgtaccgatcgtgttgccgacgagatgatgaaacgt
attcaggcggttgaattcgatcccgtaacagggcgtcaaaaaccgatgaattcgatttac
atgatgtcccactccggtgctcgtggatcgccgaaccagatgaagcagttgggcggtatg
cgtggcttgatggctaaaccttcgggcgaaatcatcgaaacgccgattatctccaacttc
aaagaaggtctgactgtgaacgagtactttaactcgacacacggtgcccgtaagggactt
gccgatacagccttaaagactgcgaactccggttatttgacccgtcgtcttgttgacgtt
gctcaggatgctatcatttccgaggttgattgcggaacggataagggcctgacaatgcag
gcgatcgtcgatgccggtcaggttgttgcctctctcggccaacgtattcttggtcgtacc
gcacttcatgatattattcatccgactacgggcgaagttatcgttgaaggcggccgcatg
atcgaggaagcagacgttgccaagatcgaagctgccggtatccagtctgtccagatccgt
tcggcactgacttgtgaaacccgcgtcggggtttgcgccaagtgctatggtcgtgatctg
gcacgtggtacacctgtcaatcagggtgaagcagtgggtgttattgccgcgcagtctatc
ggcgaacccggtacacagttgacaatgcgtacattccacttgggtggtactgcacaggtt
gttgatacttcctatctggaagcatcctatgaaggtaaggttgaactgcgcaatcgtaag
gttgttcgcaattctgaaggccatctggtcgttatgggccgtaatatggctatccttatc
aaggatgaaaatggcaaggaacgcgcttcccaccgtattacctacggtgcccgcatcttc
gtcgatgatggcgatgtggttaaacgcggccaacgtattgccgaatgggatccgtatacc
cgtccgattatgactgaagtcgagggctatgtcgggttcgaggatatgcttgacggtctg
tctgttacagagacaaccgatgaatcaaccggtatcaccaaacgtcaggttattgactgg
cgcgccaacccccgtggtgcagaactcaaacctgccattgttatctatgcggataagaag
ggcagcaagattgccaagctctcgaagggcggtgatgcgcgttacatgatgtcggtggaa
accattctttcggttgaaccgggtgctcatgtcaaagccggtgacgtgatcggacgtctg
ccgatggaaagcgccaagaccaaggatattaccggtggtcttccgcgtgttgccgagctt
tttgaagcccgtcgtccaaaggatcatgccattattgctgaaattgatggtacaatccgc
tttggacgcgactacaagaacaaacggcgtatcacgatcgaaccgaatgatgacacggtc
gagcctgtcgaatatcttattccgaagggcaagccgttccatctgcaggatggtgaccag
atagaaaagggtgattacatccttgacggtaatccggcaccgcatgatattctggcaatc
aagggcgtggaagcattggcttcctatctcgtcaacgagatccagtcggtttatcgcctt
cagggtgttgtgattaacgataagcatatcgaagtcattgttcgccagatgctgcaaaaa
gtcgaaattaccgattccggtgattcaggctatattccgggtgacaatgtcgaccggatc
gagcttcaggaagtcaatgatcggctcatcgaagaaggtaagaaaccggcaagcggtaat
cctgtcttgttgggtattacaaaagcttcgttgcaaacgccgtcgtttatttcggctgct
tccttccaggagaccacacgcgtgcttacagaagctgcggttgccggaaagatggatacc
ttgcagggcttgaaggaaaacgttatcgttggtcgtcttatccctgccggtacaggtggc
acaattgcccaaatccgtcgtattgccacagctcgtgacgatttgatcgttgacgaacat
cgcaaggcaaatggcggtgataaagcaaatgcaatgttgtcggatatgacacatacggct
gctgaataa |
|---|
