Bartonella apis: BBC0122_011260
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Entry
BBC0122_011260 CDS
T05086
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bapi
Bartonella apis
Pathway
bapi03410
Base excision repair
bapi03430
Mismatch repair
bapi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bapi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBC0122_011260
03430 Mismatch repair
BBC0122_011260
03440 Homologous recombination
BBC0122_011260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bapi03400
]
BBC0122_011260
DNA repair and recombination proteins [BR:
bapi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BBC0122_011260
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BBC0122_011260
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BBC0122_011260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
QRPTase_C
Motif
Other DBs
NCBI-ProteinID:
AQT47245
UniProt:
A0A1U9MH61
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All DBs
Position
1291585..1293369
Genome browser
AA seq
594 aa
AA seq
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MIQRKQNFLGVTRSAVGRSWTESLDREGVNNARSLSQKFGIAEPLARVLAARSVSEDEVL
NYLEPTLKTLTPDPTTFIDMEKATDRILQAINRKEKVTIFGDYDVDGACSSAILYQFLTF
FGLDVHIYIPDRLVEGYGPNPQAMRMLADEGSSLIVTVDCGANSPEAIKAAREKGVDVVV
LDHHQMGEVDPAANALVNPNRPDDRSGQGYLCAAGLVFIAVAWTLKKIRTEGKHKTLPDI
LRYLDLVALATVCDVVPLVGVNRAFVIKGLKVARMMSNPGIAALSRVAGIGEPLNVFHLG
FLLGPRINAGGRIGDQALGARLLTTQTESDAESIAEELNALNQERQNIEAKQLLEAEVGL
QSLTLDETPSVIVVAHEGWHPGIVGILAARLKEKFRCPAFAIAIKNDGTATGSGRSIAGV
NLGELVREAVQSGLLEKGGGHAMAAGVTISSGKIDEFRKWLNEKLSSKVNDLHAHETLLV
DGVLSASGATRELYEMLEKAGPFGSGNPLPVFVLPSHRLADVREVGKGHLMMSISNTEGK
RLKAIAFRAVGTDLGDFLMTHLGKNIHVAGNLNLNYWNGQASPQFRVIDAAEPE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgatacagcgtaaacaaaattttttgggagtaacccgctccgcagtcggtcgaagctgg
acggaaagtctcgaccgagaaggggtgaataatgctcgctccctatcacaaaaattcgga
attgcagaacctttggcgcgtgttcttgcagcccgctcggtttccgaagacgaagtcttg
aattatcttgaaccaactttgaaaacgttgacgcccgatcccacgacttttattgatatg
gaaaaagcaacggatcgtattttgcaggcgatcaaccggaaggaaaaggtcactattttc
ggtgattatgatgtcgacggtgcttgttcttctgccattctctatcaatttttgacgttt
ttcggtcttgatgttcatatctacatacccgatcgccttgttgaaggatatgggccaaat
ccgcaggctatgagaatgctggcagatgaaggctccagtctgattgtaacagtcgattgc
ggtgcgaatagccccgaagctataaaagctgcccgtgaaaaaggtgtggatgtggtggtg
cttgaccatcaccagatgggggaagtcgatcctgcggccaacgctcttgtcaatccaaac
cgtccggatgatcgttcggggcagggctatctttgcgcggcaggccttgtgtttattgcg
gtggcgtggacactgaaaaaaattcggactgaaggaaaacataaaacccttccggatatt
cttcgttatcttgatcttgtggcgcttgcgacagtgtgcgatgttgtgcctcttgtcggt
gtcaatcgggctttcgttatcaaggggcttaaagtggcgcgaatgatgtccaatccgggc
attgccgcactttcacgggttgccggaattggtgagccgctcaatgtgtttcatctcggt
tttctgctcggacctcgcataaatgcaggtggccggattggcgatcaggcactgggagcg
cgtttgctgacgacacagacagaaagcgatgccgagtccattgcggaagagctcaatgct
ttaaatcaggaaagacaaaatattgaagcaaagcaactccttgaagccgaagtcggctta
caatcattgacacttgacgaaaccccgagtgttattgtggttgcccatgaaggatggcat
cccggaattgttggtattcttgccgccagactgaaagaaaaattcagatgtccggctttt
gcgatagcaatcaagaatgacggcacggctacgggatcgggtcgttcgatagccggtgtc
aatcttggagagcttgtccgtgaagccgttcaatcaggattgcttgaaaaaggcggaggc
catgcaatggccgccggtgtgacgatttcaagcggtaaaattgacgaattcagaaaatgg
cttaacgagaaattgtcttcaaaggtcaacgacttgcatgctcacgaaaccttgttggtt
gacggtgtcctttcggcttccggagccacgcgggaactctatgaaatgcttgaaaaagca
ggccctttcgggtcgggaaatccattgccggtgttcgtgttgccgtcgcaccgtttggcc
gatgtccgtgaggtgggtaaaggccacctgatgatgtctatttctaatactgaaggcaaa
agattgaaggctattgcatttcgtgcagttggcacagatttgggtgacttcctgatgacc
catttggggaaaaacatccatgttgcgggcaatctcaaccttaactattggaatggacaa
gcttcgccacaatttcgcgttattgacgctgccgagccggaataa
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