KEGG   Bartonella apis: BBC0122_011530
Entry
BBC0122_011530    CDS       T05086                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bapi  Bartonella apis
Pathway
bapi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bapi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BBC0122_011530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bapi03019]
    BBC0122_011530
Messenger RNA biogenesis [BR:bapi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BBC0122_011530
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B_2 RNase_J_C RMMBL Lactamase_B
Other DBs
NCBI-ProteinID: AQT47270
UniProt: A0A1U9MHS0
LinkDB
Position
1320367..1322043
AA seq 558 aa
MASRKNNELVFLPLGGVGEIGMNLGVYGYGPEDNRKWLIVDLGVSFAGPELPGVDLVMPD
IRFLENERPNILGLVVTHAHEDHFGAILDLWPKLKIPVYCTAFTAGLLETKREIDYNSYD
VAVTLFKAGDRFELGPFSIEAIAVAHSIPEPVALAIKTPLGTVVHTGDWKIDLEPSLGAL
TDEKRFRELGKEGVLALVCDSTNSMRDGVSPTEHDVFKSLTEIISGEKGRVAITTFSSNV
GRIISIAKAAKEAGRQVLLVGRSIKRSVNVAEELGYLEGIDPFLSEEDYPYIPRDKIVMV
LTGSQGEQRAALAKLSRDEMRSLALTAGDTVIYSSRSIPGNERAIIDTQNRLTDMGVKII
TDHDALVHVSGHPRRNDLKKMYEWVKPQILVPVHGEALHLAAQTALGRQAGIKQVAEIRN
GDMLKLAPEPAEIVDEVPVGQIYKDGNLIGNEEELGISQRRKLSYVGQVSASFLLDKHHN
LVDVPEVVCFGLPETDDEGNLFDDIITDAIETTIESIPRVKRKDDDMVREAVRRAVRASV
NEIWGKKPVCTIFSHRLR
NT seq 1677 nt   +upstreamnt  +downstreamnt
atggcatcacgcaaaaataatgagttggtttttctaccacttgggggcgtaggcgagatc
ggtatgaatctcggcgtttatgggtacggtcctgaagataaccggaaatggctgatcgtt
gatctcggtgtcagttttgcaggtcccgagttaccgggtgttgatcttgtcatgccggat
atacgttttctggaaaacgaacgcccgaatatattagggttggtcgtaacgcacgcccat
gaagaccatttcggcgcgatattggatttgtggccgaaattgaagatacctgtttactgt
accgcatttaccgcaggcttgttggaaacaaagcgcgaaattgattacaattcttatgat
gtggcggttactctgttcaaagccggtgatcgttttgaactggggccgttttcaatcgaa
gcaatagctgttgcccattctattcccgaaccggtagcattggcaattaaaacgccgctc
ggaacggttgttcacaccggcgattggaaaattgatcttgaaccgtcacttggcgcctta
actgatgaaaagcggtttagagaattgggcaaagagggcgtacttgcactcgtctgcgac
tcgacaaattcgatgcgggacggcgtatcaccgacagaacatgacgtttttaaaagcctg
accgaaataatctcaggtgaaaaaggacgcgtcgcgattacaactttttcatccaatgtc
gggaggattatttcaatagcaaaggcggccaaggaagctggccgacaggttttactggta
ggccgctcgataaaacggagtgtcaatgttgccgaagaactcggctatcttgaaggcatt
gatccgtttctgagtgaggaagactatccatatattccgcgcgataaaatcgttatggtt
ttgacgggaagtcaaggagagcaaagagcagcacttgccaaattgtctcgtgatgaaatg
cgttcgcttgcgttaacggctggcgatacggttatttactcttcgcgcagtattcccgga
aatgaaagagctattatcgatacgcaaaaccgcctgacagacatgggtgtgaagattatc
accgatcatgacgcacttgttcatgtttccggacatccacgtcgtaacgacctcaagaaa
atgtatgagtgggtaaaaccgcagattttggttccggttcatggtgaggctcttcatctg
gcagcacaaacggctttggggcgtcaggcgggtatcaaacaagtggcagaaatacgcaat
ggcgatatgttgaagcttgcgcctgaaccagccgaaattgttgatgaagttccggttgga
caaatttataaagacggaaatctcattggcaatgaagaagaattggggattagtcaaagg
cgaaaattaagctatgtagggcaggtatcagcgtcattcctgttggacaagcaccacaat
ctcgtcgatgtgcctgaagttgtctgtttcggtttgccggaaacagatgacgaggggaat
ctttttgatgacattattacagacgcaatcgaaacgacgattgaaagtattccccgtgta
aagcgtaaagatgacgatatggttcgggaagctgttcgacgggcggtcagagcatctgtt
aacgaaatatggggcaaaaaaccggtttgcacaattttctcccacaggttgagataa

DBGET integrated database retrieval system