Bartonella apis: BBC0122_012990
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Entry
BBC0122_012990 CDS
T05086
Name
(GenBank) Murein L,D-transpeptidase YcbB/YkuD
KO
K21470
L,D-transpeptidase YcbB
Organism
bapi
Bartonella apis
Brite
KEGG Orthology (KO) [BR:
bapi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bapi01002
]
BBC0122_012990
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bapi01011
]
BBC0122_012990
Peptidases and inhibitors [BR:
bapi01002
]
Cysteine peptidases
Family C82
BBC0122_012990
Peptidoglycan biosynthesis and degradation proteins [BR:
bapi01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
BBC0122_012990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
MbeB_N
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
AQT47410
UniProt:
A0A1U9MI57
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All DBs
Position
complement(1496814..1498823)
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AA seq
669 aa
AA seq
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MFQKPINRLVFTFLASSVLYVSPYFGVEQASAINNLMELFSKKTKPATVVEMPTDSGSQT
NRQDNFPAKPQNALSDKIHDKSTKRPDVEKTRQADSARPKVTDYKPERLVPVEFSNVDFI
ETNSVMKSSGSGSLPLSEPYNVILEGSDEGRNNSTARMVKSDFSRIDVKVENAIAESVTK
HYVNHPDLLWSKNGEITDTTRNIMAFLSNVDEDGLEPQDYFVKLPDETLDGEERSLAFTN
FDVALTSRIFRYIQDAANGRIIADRLSPFHDLPRNQIDFEKELDRFTKSDDPVAELKSYL
PQSDYYKALKHALAGMPKSDHGDNIRISLTTLIKPGQTNEDLPQFTNLLLKRAPSGYLSD
HKTILEKFQHETSYNAQLVESVKDYQKFIGKTADGIIGPSTIASLENNTVAAKRQKIMDS
MERLRWLPHSFGSRYVFINQAAFKGQYIENNAVKLDMKVVVGSPQRQTYFFYDRIRLVTF
NPSWGVPHSIVVNEMLPRIMQDSGYLQRNNYQLYDSSGRPISASSVNWQQVGSKARGISI
RQTPGRNNALGELKILFPNKHDIYLHDTPNKTAFSRDMRALSHGCVRLEYPREMAAAVLG
KNVDDLKPYFAKGERSLSLSEPVPVYLTYFTAWPDLKTGKINYYDDIYGRDELMTNAVQK
TDSMRQSDI
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaaaaccaatcaatcgccttgtttttacctttcttgccagttcggtgctttat
gtctcaccttatttcggtgtggagcaagcatctgctatcaataatttgatggaattgttc
agtaaaaaaacaaagccggcaacagttgttgaaatgccaacagattcgggcagtcaaacc
aacaggcaagacaattttccggccaagccgcaaaatgcgttatccgataaaatacatgac
aagtcgacaaagagacccgatgtcgaaaagacgagacaggccgacagcgcaaggccgaaa
gttaccgattataagccggaacggctagtgcccgtcgaattttcaaatgtcgacttcatc
gaaacaaattcggtaatgaagtcttccggttcaggcagtttgccgctctcggagccttac
aatgttattcttgaggggagcgatgagggtaggaataactctactgcccgaatggtgaaa
tcggatttttcccgcattgacgtgaaggtggaaaacgcgattgccgaatctgtcaccaaa
cattacgtgaatcatcctgaccttttatggtcgaagaatggcgaaatcaccgatacgacc
agaaacattatggcctttttgtccaatgtcgacgaagatggtttggagccgcaagattat
tttgtaaagctgccggatgaaacgcttgatggcgaagaacgtagcctcgcattcaccaat
ttcgatgtcgctttgacaagccggatttttcgttacattcaggatgcggctaacggccgg
attattgccgaccgtctttcgccttttcatgatttgccacgcaaccaaatcgactttgaa
aaggaattggatagatttacaaaaagcgatgatccggttgccgagttaaagtcatatctc
ccacagtccgattattataaggcactgaaacacgccttggcaggaatgccaaagagtgac
catggagacaatatcagaatatcgctcacaaccctcatcaaacccggtcaaacgaatgaa
gatttacctcaatttaccaatcttcttttgaaacgggctccatccggctatctttccgat
cacaaaacgatattggaaaagtttcaacacgaaacctcctataacgcacaattggtagaa
agcgtaaaagactaccaaaaatttattggcaagacggcagatggtattattggcccctcg
acgatcgcatcactggaaaacaatactgtcgcagccaaaagacaaaaaattatggattcg
atggaacgtttacgctggctgccgcacagtttcggttcacgttacgtttttatcaatcag
gcagcttttaaggggcaatatatcgaaaataacgccgttaaactcgatatgaaagtcgtg
gttggtagccctcaaagacaaacctattttttctatgacagaataagacttgttacattc
aacccttcctggggcgttccacattcgatcgtggtcaacgaaatgctgcctcgcatcatg
caggattcggggtatcttcaacgtaacaattaccagctttatgacagttccggtcggccg
atttccgcttcgtctgtcaattggcaacaagtgggctctaaggcacgcggaatcagtatt
cgccagacaccgggcagaaataatgctctgggtgaactcaagatacttttcccgaacaag
catgatatttatctccatgatacgcctaataaaaccgctttttcgcgcgatatgcgggca
cttagccatggttgcgtgcgtcttgaatatccgcgtgaaatggcagccgccgtacttggc
aagaatgtagacgatttgaagccttattttgcaaaaggcgagcggagcctgtcactaagc
gagccggttcctgtctatctcacctattttactgcatggcctgatttgaaaaccggcaag
atcaattattatgacgatatttatggacgcgatgaattgatgaccaatgctgtccaaaaa
acagattcaatgcgacaatccgatatttaa
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