Bartonella apis: BBC0122_013860
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Entry
BBC0122_013860 CDS
T05086
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bapi
Bartonella apis
Pathway
bapi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bapi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BBC0122_013860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bapi03021
]
BBC0122_013860
03400 DNA repair and recombination proteins [BR:
bapi03400
]
BBC0122_013860
Enzymes [BR:
bapi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BBC0122_013860
Transcription machinery [BR:
bapi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BBC0122_013860
DNA repair and recombination proteins [BR:
bapi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BBC0122_013860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
Motif
Other DBs
NCBI-ProteinID:
AQT47496
UniProt:
A0A1U9MI12
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All DBs
Position
complement(1596525..1597538)
Genome browser
AA seq
337 aa
AA seq
DB search
MIQKNWQELIKPNKVEFQTQGGSNKAVVIAEPLERGFGLTLGNALRRVLLSSLRGAAITA
VQIDGVLHEFSSIPGVREDVTDIILNIKEIAIRMEGEGPKRMVVRKEGPGVVTAGDIQTV
GDVEILNPEHVICTLDQGAEIRMEFTVNTGKGYVPADRNRNEDAPIGLIPVDSLYSPIRK
VSYKIENTREGQVLDYDKLILTVETNGAVSAEDAVAFAARILQDQLSVFVNFEEPQKEAP
QEQVSELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLSTPNFGRKSL
NEIKEVLASMGLHLGMEIPAWPPENIDDLAKRYEDQY
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgatccagaaaaactggcaggaactgattaagcctaataaagtcgagtttcagacgcag
ggtggttctaacaaagctgttgtgatcgccgagccgctggagcgtggttttggtttgaca
ttaggtaacgctttacggcgtgtattactgtcttctttgcgcggagcggcaattactgct
gtgcagattgatggtgtgttgcacgaattttcgtcgatacccggtgtgcgggaagacgtt
acagatattattctgaatatcaaggaaatcgccatccgcatggaaggcgaaggtccgaaa
cggatggttgttcgcaaagaaggtccgggtgttgtcacagcaggcgatatccagacagtc
ggcgatgtcgagattctcaatccggaacatgtgatttgcacgctcgatcagggtgccgag
atcagaatggaatttacggtcaacaccggtaagggctacgttcctgccgatcgcaatcgt
aatgaagatgctccaatcgggcttattcccgttgatagcctctattctcccattcgcaaa
gtttcgtacaagatcgagaacacacgcgaaggtcaagttctcgactacgacaagttgatc
ctgactgtcgagacgaacggtgcggttagtgcagaagacgctgtagcttttgctgcccgt
atcctgcaagaccagctttctgtattcgtcaattttgaagaaccgcagaaagaagctccg
caagagcaggtttccgagcttgcattcaaccccgcattgctcaagaaagtggatgaactg
gagctttcggttcgttcggccaattgtcttaaaaacgacaatatcgtttatattggtgac
cttatccagaaaacggaagcagaaatgctgagtacgccgaattttggtcgtaagtcactt
aatgaaatcaaggaagttctcgcgtcaatggggcttcatcttggtatggaaatccccgct
tggccgccagagaatatcgacgaccttgcaaaacgttatgaagatcaatactga
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