Ditibartonella choladocola: BBC0122_024690
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Entry
BBC0122_024690 CDS
T05086
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bapi
Ditibartonella choladocola
Pathway
bapi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bapi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBC0122_024690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bapi03021
]
BBC0122_024690
03019 Messenger RNA biogenesis [BR:
bapi03019
]
BBC0122_024690
Transcription machinery [BR:
bapi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BBC0122_024690
Messenger RNA biogenesis [BR:
bapi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BBC0122_024690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
NACHT
AAA_22
OB_RNB
Fungal_virus_P2_C
AAA
S1CSD-TOTE-2
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
AQT48535
UniProt:
A0A1U9MKU1
LinkDB
All DBs
Position
complement(2904238..2905512)
Genome browser
AA seq
424 aa
AA seq
DB search
MQNIQQMKLQELKSKTPVELVAFAETLEVENASLMRKQELMFAILKKLALQDVEIIGEGV
LEVLLDGFGFLRSADANYLPGPDDIYLSPSQIRRFSLKTGDTVEGPIRSPKEGERYFALL
KINTINFEDPEKIRHKIHFDNLTPLYPNERLKMELNDPTNKDMSARVIDLISPLGKGQRA
LIVAPPRTGKTVLLQNIAHSITANHPECFLIVLLIDERPEEVTDMQRSVKGEVVSSTFDE
PASRHVQVAEMVIEKAKRLVEQGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANAL
QRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRI
FPAMDILKSGTRKEDLLVSRQDLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKTNAEFFD
SMNT
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatattcaacagatgaaactacaagagctgaaaagtaagactccggtcgagctt
gtcgcttttgccgaaacgctggaagtcgaaaatgcttcgttaatgcgcaaacaggaattg
atgtttgccattttgaaaaagcttgcccttcaggatgttgaaattatcggtgaaggtgtt
ctggaagttttgctcgacggtttcgggtttttacgctcggccgatgccaattatcttcca
ggtcctgatgatatttatctttccccttcgcaaatcaggcggttttcattaaaaaccggc
gacactgttgaaggaccgatacgcagccccaaagaaggcgagcgttattttgctctgtta
aaaatcaatacgatcaattttgaagatccggaaaaaatccgccataaaatccattttgac
aatttgacacctctctatccgaacgagaggttgaaaatggaattgaatgacccgacaaac
aaggatatgtcggcaagggtcattgatcttatctcgcctttgggtaaagggcagcgtgca
ctgattgttgcacctccaagaaccggtaaaacagttcttctgcaaaacattgcccattca
atcacagccaatcatccggaatgttttctgattgtgttgctcattgatgaacgtccggaa
gaagtgaccgatatgcaacgttcggtcaaaggcgaagttgtttcttcaacatttgacgaa
cccgcatcccgtcacgttcaggttgccgagatggtcattgaaaaagcaaagcgccttgtt
gaacaggggcgcgatgtggtcattctccttgattcgatcacccgtcttggtcgtgcctat
aatacggttgttccttcatcaggaaaggtcttgaccggtggtgttgatgctaacgcttta
caacgccccaagcgcttttttggtgcagcccgcaatattgaagaaggcggttcgctcaca
attattgcaacggctttgatagataccggaagccgtatggatgaagttatttttgaagaa
ttcaagggaaccggtaactcggaaatcgtgcttgaccggaaagtagccgataagcgaatt
ttcccggcaatggatattttgaaatccggaacccgcaaggaagatttgttggtttcccgt
caggatctgcaaaaaatatttgttttgcgtcgtattctcgctccaatgggcacaaccgat
gcaatcgaatttttgattgataaattgaagcagacaaaaaccaatgcggaatttttcgat
tcgatgaatacctga
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