Bombiscardovia apis: KIMH_00060
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Entry
KIMH_00060 CDS
T09714
Symbol
gyrB1
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bapk
Bombiscardovia apis
Brite
KEGG Orthology (KO) [BR:
bapk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bapk03032
]
KIMH_00060 (gyrB1)
03400 DNA repair and recombination proteins [BR:
bapk03400
]
KIMH_00060 (gyrB1)
Enzymes [BR:
bapk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KIMH_00060 (gyrB1)
DNA replication proteins [BR:
bapk03032
]
Prokaryotic type
DNA Topoisomerases
KIMH_00060 (gyrB1)
DNA repair and recombination proteins [BR:
bapk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KIMH_00060 (gyrB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
BDR53895
UniProt:
A0ABN6SCR6
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All DBs
Position
5262..7379
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AA seq
705 aa
AA seq
DB search
MAERNTDLSQDSQDAKRPDEQMQDGASNIQESQLGNAQLDDSLAPEHYDASDLRVLEGLE
AVRIRPGMYIGSTGPRGLHHLVYEIVDNSVDEALAGYADHIEVTILPDNGIRVDDNGRGI
PVDEVPGEGISGVETVMTKLHAGGKFGGGGYAVSGGLHGVGISVVNALSTRIEVEVRRQG
FHWHQTYLNQHPQAPLSKDEPLGPDEATGTSVTFWPDSEIFETTVYDFETLRARFQQMAF
LNKGLRLTLTDERQPDLAGDEVAGEDEPASREQTVTYRYENGISDYVNFLVTTKKATPVE
DDIIDFEAEDLHLGISAEIAMQWTGAYSESVHTFANTISTTEGGTHEEGFRAALTMMVNR
YAREKNILKDKDENLSGDDVREGLTAVVSVKMTNPQFEGQTKTKLGNPEAKTFVQRVMTE
RLTDWFDAHPSEAKAIIQKGIDASRARIAAKKARESTRRKSIFETAGMPDKLKDCQSNDP
DECELFIVEGDSAGGSAIQGRNPLTQAILPLRGKILNTERASLDRMMKSDTIESLITAVG
AGYGEDFDLSKVRYHKVIIMADADVDGAHIATLNLTLFFRYMRPMITAGYVYVAMPPLYR
LKWTKGPHDFVYTDAERDRVLAEGKDKGRQLPKGEGIQRYKGLGEMSYQELWETTMDPDH
RILKKIHIEDAAQADETFTMLMGDEVEPRRLFIQRNAKDVRFVDA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
gtggcagagcgtaatacggacttgtctcaagattcgcaggatgctaagcgtcctgacgag
cagatgcaggatggggcttcgaatatccaagaaagtcagctgggaaacgcccaattagat
gattcgctagctccagaacattatgatgcgagcgatttgcgcgtgcttgagggccttgaa
gctgtgcgtatccgtccgggtatgtatatcggctcaaccggtcctaggggtttacaccac
ttagtctatgagattgtcgacaattcagtcgatgaggcgctggcaggctatgcagaccac
atcgaagttactattctgccagacaacggcattcgcgtagacgacaacggccgaggtatt
cctgtcgacgaagtgcccggcgaaggcatttccggcgttgagacggtgatgactaagctc
cacgcaggcggcaagtttggtggcggcggctatgcagtttccggcggtctgcacggtgtg
ggtatttccgtggtcaacgctctctccactcgcattgaggttgaagtgcgccggcagggc
ttccactggcatcagacttacctcaaccagcatccacaggctcccctatccaaggacgag
ccgctggggccagacgaggcaacgggcacttccgttacgttctggccagattccgaaatc
ttcgagacgaccgtctacgattttgagaccttgcgcgctcgcttccagcagatggccttc
ctcaacaagggcctgcgcctcacactaaccgatgagcgtcagcctgacttagctggggac
gaagtagctggtgaagatgagccagccagccgtgagcagacggtgacttaccgctatgag
aatggtattagtgactatgtgaacttcttggtcaccactaagaaagccactcctgttgaa
gatgacatcatcgactttgaggccgaggacttgcatcttggtatttctgctgaaattgcc
atgcagtggacgggcgcctattccgagtcggtgcacaccttcgccaacaccatttccacg
accgagggcggtacccacgaagagggcttccgagcggcgcttacgatgatggtcaaccgt
tacgctcgtgagaagaacatcctaaaagataaggatgaaaacctttccggcgacgacgtg
cgcgagggcctaaccgctgtggtttcagtcaagatgaccaacccccagtttgagggccag
accaaaacgaagctgggcaatcctgaggccaagaccttcgtgcagcgcgtgatgaccgag
cgtttaacggattggttcgatgctcaccctagcgaagcaaaagccattattcaaaagggt
attgatgcttctcgggcccgtattgctgctaaaaaggcgcgcgaatctacccgtcgcaag
tctatttttgagacggccggcatgcccgacaagctcaaggactgccagtccaacgaccct
gatgagtgcgaactcttcatcgtcgagggcgattccgcaggcggctcagctattcagggt
cgcaatcccctgactcaggctattttgcccctgcgaggcaagattttgaacacggagcgc
gcttctctcgatcgcatgatgaagtctgacaccatcgaatcacttattaccgcggttggt
gccggctatggtgaggactttgacctctccaaggtgcgctaccacaaggtcatcatcatg
gccgacgccgacgtggacggtgctcacatcgctacactcaatctgacgctcttcttccgc
tatatgcgcccgatgattaccgccggttatgtatacgtggcaatgccccctctttatcgt
ctcaagtggaccaagggtccccacgacttcgtatacaccgatgcagagcgcgaccgtgtt
ctggcagagggtaaagataagggtcgtcagctgcccaagggcgaaggcatccagcgttac
aagggtctgggtgagatgagctatcaggagctgtgggaaactacgatggatcccgaccac
cgcatcttgaagaagattcacattgaagacgcggctcaagccgacgaaaccttcaccatg
cttatgggcgacgaagtagaaccccgcaggctcttcattcagcgcaacgccaaggatgtg
cgcttcgtagacgcctga
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