Bombiscardovia apis: KIMH_00540
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Entry
KIMH_00540 CDS
T09714
Symbol
pbp
Name
(GenBank) penicillin-binding protein
KO
K05364
penicillin-binding protein A
Organism
bapk
Bombiscardovia apis
Pathway
bapk00550
Peptidoglycan biosynthesis
bapk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bapk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KIMH_00540 (pbp)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bapk01011
]
KIMH_00540 (pbp)
Peptidoglycan biosynthesis and degradation proteins [BR:
bapk01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
KIMH_00540 (pbp)
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GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer_2
Beta-lactamase2
GSK-3_bind
Motif
Other DBs
NCBI-ProteinID:
BDR53943
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Position
complement(75612..77075)
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AA seq
487 aa
AA seq
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MNKALRQLFTAVIALFVVLGLSSTTIMGIRANALNNDPRNTRALYAEYGAPRGSILASDG
TILAQSDPINDTFQYQRAYTSGPLYAPVTGYYSITNGSDRGIENSRNRLLSGQADSLWFD
KIRALFTGAQNKGASIETSISPKLQEAAYQALGGQSGSVVAIEPSTGRILAMVSTPSYDP
NTLATHDTNAAVQAYNDIAHQEDNPMLNRATSQLYPPGSTFKVIVAAAALESGKYHADSQ
IPAGAAYTLPGTSVNLTNATAAGNGYSGKIAMQDALAYSSNTAFAQLGVSLGGQSLADQA
KKFGYGSTITIDGTDSTGQPMKATASKFPADATPDKLAQASIGQGDTLNTPLQNAMVAAA
VANGGKLMQPTLVDRVRSSDLSVLSEASPSVYSEPFSEDTAKALTAMMEAVVTKDSPNLQ
IPGAQVAAKTGTAQIGVGNTANDGWTIGFAPAQQPKIAVAVVVHSTNTFGAASAGPIMKR
VMQEALK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcgctccgtcagctatttactgccgttattgccctcttcgttgtcctaggt
ctttcgtctactacgatcatggggatccgagccaacgcgctcaacaacgacccccgcaac
actcgcgctctttatgctgaatacggcgcgcctcgcggctcaatcctagcttccgatggc
actattttggcccaatcagaccccatcaacgacactttccaatatcagcgcgcctacacg
tccggccccctttacgctcccgtaaccggctactattcaattaccaacggcagcgaccgc
ggcatagaaaactcgcgcaaccgcctactttcgggccaagccgatagtctctggttcgac
aagatccgggctctctttaccggcgcacaaaacaagggtgcttccatcgagacttcgatc
agccccaagcttcaggaggccgcttaccaagccttgggcgggcagtcgggctctgtagtg
gcgattgaaccttcgaccggccgaatcttggctatggtttccacgccctcttacgaccct
aatacgctggccacgcacgacacgaacgcagccgtccaagcctataacgacattgcccac
caagaagacaatcccatgctgaaccgtgccacctcccagctctacccacccgggtccacc
ttcaaggtcattgtggcagcggcagctctagaatcgggtaaataccacgcagattcgcag
attcccgcgggcgctgcatacacactgccgggcacatcagttaacctgaccaacgccacg
gcagcaggcaatggctacagcggcaaaatcgccatgcaagacgcgctggcctactcctcc
aacacggcttttgcccaactcggcgtgagcttaggcggccaaagcttagctgaccaagcc
aagaagtttggctacggttcaacgattaccatcgatggtacagattcaaccggccagccc
atgaaggccacggcttccaagttccctgccgacgccacgcccgacaagctcgcccaagcc
tccatcggccaaggcgacaccttgaacacacccctgcaaaacgcaatggtggcggccgcg
gtagccaacggcggtaagctcatgcaacccacgctggtagaccgcgtgcgctcctctgac
ttaagcgtcttaagcgaagcctcgccttccgtctattccgagcctttctccgaagatacg
gccaaggcgttgactgcgatgatggaagcagtagtcaccaaggattcgcccaacttacag
attccgggggctcaggtggccgctaagaccggcaccgcgcaaatcggcgtaggcaacact
gccaacgacggctggaccatcggtttcgcaccggcccagcagcccaagattgcagtagcc
gtagtagtccattccaccaatacgttcggcgctgcctcagccgggcctattatgaagcga
gtcatgcaggaggcgctcaaatga
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