Bombiscardovia apis: KIMH_04580
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Entry
KIMH_04580 CDS
T09714
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bapk
Bombiscardovia apis
Pathway
bapk03420
Nucleotide excision repair
bapk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bapk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KIMH_04580
03430 Mismatch repair
KIMH_04580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bapk03400
]
KIMH_04580
Enzymes [BR:
bapk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KIMH_04580
DNA repair and recombination proteins [BR:
bapk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KIMH_04580
MMR (mismatch excision repair)
Other MMR factors
KIMH_04580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Viral_helicase1
AAA_30
DUF6771
Motif
Other DBs
NCBI-ProteinID:
BDR54347
LinkDB
All DBs
Position
615084..616589
Genome browser
AA seq
501 aa
AA seq
DB search
MSKQAQAEQLLEGLDPSQLQAAQALEGPVRIIAGAGAGKTRTITHRIAYACANDAWDPAR
TLAVTFSVKAAGELRSRLSSLGVSEHVNAATFHSAALHQLRQAWPDISDSYFPQVVQDLR
PFMSRAFQRITSQSEPEPQDMRTLLDEVGWAKVSLIAPDDYARVCAATHREPPLGLDPTR
MADIMESFELEKTYYGAMDFNDILLMTCHVLEEFDEAASRIRNSLGWITVDEYQDVSPLQ
HRLLDLWLGHNRSVCVVGDPAQTIYSFAGASSYYLLDFDHEFAPVSADIELNTDYRSTPQ
IVDFANRILAASPERGDYLKLNSQNDSGPRVNFMRYESDEQEAQGVVRRIERMIGRGAQP
GECAVLTRINAQQQLICAKLKEAGIHYRVRTEAGWQRSMSTEQLSQLDSKELLETLRGQG
PGMVTISTVHASKGLEFDHVFLVGCSEGLVPFGSPQSGPALEEERRLMYVAVTRAGETLH
VSFADRKDSAGGPLRSPSRFI
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaagcaagcgcaggcagaacaattgctcgaagggctcgacccttcgcagcttcag
gcagcccaagctctcgaagggccggtgcgcattattgcaggtgcaggagcgggtaaaacg
cgtactattacccatcgtattgcctatgcttgcgccaatgatgcttgggatcccgctcgc
acgttagcagtgaccttctcggttaaagcagcgggggagttgcgctcgcggctcagtagc
ctaggcgtgagtgaacacgtcaatgcggccaccttccactcggctgccctccaccaactg
cggcaggcttggcccgatatttcagactcgtattttccgcaggtagttcaagacttgcgc
ccttttatgtctcgcgctttccaacgaattactagccagagcgagcccgaaccgcaagat
atgcgcaccttgcttgacgaggtgggctgggccaaagtttcgcttatagccccagacgat
tacgctcgtgtctgtgccgcaacgcaccgggagccgcctctgggccttgaccccacgcgc
atggccgacattatggagtccttcgaattggagaagacctactacggggctatggatttc
aacgatattttgctcatgacttgccatgttttagaggagtttgacgaggcagcaagcagg
attcgcaactctctaggctggattaccgtcgacgagtaccaggacgtttcgcccctgcaa
cataggcttttagacttgtggttgggacacaaccgctcggtgtgcgtagtaggagaccct
gcgcagaccatctactcctttgcgggagccagctcctattatttactggactttgaccat
gaatttgcgccggtcagtgcggacatcgaactcaacaccgactaccggtcaacccctcaa
atcgttgattttgccaaccgaatcctggctgcttcacctgagcggggagactacctcaag
ctcaattctcagaacgattctggcccgcgagtgaacttcatgcgctacgagagcgacgag
caggaagcgcaaggtgtagtgcgccgtattgagcgaatgataggccgcggggcgcaaccg
ggggagtgcgcagtcttaacccgcatcaacgcccagcagcagttgatatgcgccaaactt
aaggaagctggtatccattaccgggtgaggacggaagcgggctggcagcgctcaatgtct
accgagcagctatcccagctcgattccaaggagttgcttgagacactgcgagggcagggg
ccgggcatggtcactatctcaaccgtccacgcctccaagggtttggaattcgatcacgtc
tttctggtgggctgctccgaaggcttagtgcccttcggctcgccgcagtctggtcctgcc
ttagaagaagagcgcagactcatgtatgtagctgttacgcgagccggggaaacccttcat
gtctcctttgctgaccgcaaggattcggcaggtgggcctctgcgctcgccttcgcgtttt
atttag
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