Bombiscardovia apis: KIMH_10780
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Entry
KIMH_10780 CDS
T09714
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bapk
Bombiscardovia apis
Pathway
bapk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bapk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KIMH_10780 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bapk03019
]
KIMH_10780 (recQ)
03400 DNA repair and recombination proteins [BR:
bapk03400
]
KIMH_10780 (recQ)
Enzymes [BR:
bapk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KIMH_10780 (recQ)
Messenger RNA biogenesis [BR:
bapk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KIMH_10780 (recQ)
DNA repair and recombination proteins [BR:
bapk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KIMH_10780 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
HRDC
RQC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
BDR54967
UniProt:
A0ABN6SI42
LinkDB
All DBs
Position
complement(1354010..1355959)
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AA seq
649 aa
AA seq
DB search
MTGMDQARASLKQYFGYESFRPGQEGLVSAILEGRDCLGVMPTGAGKSICYQIPATLVEG
VTIVISPLVSLMRDQVDSLEDAGIHAGFVNSTQSPDEQALVLSQAARGECKLLYVAPERL
GAPRFMEFAQRTPIGLLAVDEAHCVSQWGQDFRPAYMGIGDFIESLPNRPRVAAFTATAT
EQVRRDIVKMLRLENPYLAVTGFDRPNLFFDVVKLETKEKNAWVCRYAKDHKDESGIVYC
ATRKETEALADMLERHGIPATNYHGGLSPDQRDTAQADFVNDEVQVVVATNAFGMGIDKS
NVRYVIHHNMPESIEAYYQEAGRAGRDGEPARCTLLWNESDIVTRRRLLDLDSGNERLTG
EEAEAVRAGHRRLLNTMIGYCRTTACLHQYMLNYFGEEAAQSVAAPSPAAVEGSEEGVPG
SDKNQQGCANCSNCLSTFSTIDVSDMARAISRCVHDVHQGFGSGKIVQVLVGSKSLDLLS
RRLDRCPSYGALEGVSVARVRDVLNQMASDGYLAITEGRLPLVQFGPKAAQTVQPDFHYE
MKQAQRKRLTVASSKASGKAYGSTSAASGGEEIVSEEQERLFQVLREVRTKIAREIGKPP
YIVFSDKSLRDMCRVKPTSDETFLEVSGVGEHKLELYGKQFIDAIRAFK
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgacaggaatggatcaggcgcgcgcctcactcaagcagtacttcggctacgaatccttt
cgcccgggccaagaaggtttggtttcggcgatattagagggccgcgactgcctcggcgtg
atgcctacgggagctggaaagtccatctgttatcagattcctgccaccctggtagagggc
gtaactattgtgatttcgccgctggtttcgctcatgcgcgatcaggttgatagtcttgag
gatgcgggcattcacgccggttttgtcaactctactcagagtccagacgagcaagccttg
gtcttatctcaggcagctcggggtgagtgcaaactgctctatgtggcgcccgagcgattg
ggggcgccgcggtttatggagtttgcccagcgcacaccgattggcctgcttgcggtagac
gaggcccactgtgtctcccagtggggccaggatttccggccggcttatatgggcattggt
gacttcatcgagagtctgccgaatcggccgcgagtggctgcttttaccgcaaccgctacg
gaacaggtgcgccgagatatcgtcaagatgctccgcttagaaaacccttacttggccgtt
actggtttcgaccggcccaacttgtttttcgatgtggtcaagctggaaaccaaggagaaa
aacgcttgggtctgccgctatgccaaagaccacaaagacgaatcgggtattgtctactgc
gccacccgcaaggagaccgaagcgctggcagacatgctagagcgccacggtattcctgca
accaactaccacggtggtttaagtccggaccagagagatacggctcaggctgacttcgtt
aatgacgaagtacaagtcgttgtagctactaacgctttcggtatgggcatcgacaagtcc
aacgtgcgctatgtgattcaccacaacatgcctgagtcaatagaggcatactatcaggag
gcgggtcgcgctgggcgagatggagaacctgcccgctgtaccttgctttggaatgagtca
gatatcgtgacccgcaggcgtttacttgatttggattcgggcaacgaacggctgacgggc
gaggaagccgaggcagtgcgcgctgggcaccggcggctgctcaacacgatgattggctat
tgccgcaccaccgcctgccttcaccaatacatgctcaactactttggagaggaggcagcc
cagtctgtcgctgctccttctccagcagcggttgaggggagtgaagaaggtgtgccaggc
tcggacaagaatcagcaaggctgtgcgaattgctccaactgcctctcgaccttctctacg
atcgacgtgtcagacatggcccgggccatatcgcgctgcgttcacgatgtgcaccagggc
ttcggctcgggcaaaattgtacaggtgctggtggggtccaagtcgctagacctcttgagc
cgacgattagaccgctgcccatcctatggagctttggaaggtgtgagcgttgctcgagtg
cgcgatgtcttaaaccagatggcttccgacggctaccttgccattaccgaagggcgcttg
cccctagtacagtttggccccaaagccgctcagaccgtgcaacccgacttccactatgag
atgaagcaggcccagcgcaagcggctcaccgtggcctcgtctaaagcctcgggcaaggcc
tacggttctaccagcgcggccagcggtggggaagaaattgtcagcgaagagcaagagcgc
ctcttccaagtcctgcgcgaggtgcgcactaagattgcccgcgaaattggcaaaccgccc
tatatcgtcttctcggataagtccctgcgcgatatgtgccgggtcaagcccactagcgat
gaaactttccttgaggtttctggcgttggcgagcacaagctggagctctacggcaagcag
tttatagacgctattcgggcgttcaagtag
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