Bombiscardovia apis: KIMH_12420
Help
Entry
KIMH_12420 CDS
T09714
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bapk
Bombiscardovia apis
Pathway
bapk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bapk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KIMH_12420 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bapk03021
]
KIMH_12420 (rpoA)
03400 DNA repair and recombination proteins [BR:
bapk03400
]
KIMH_12420 (rpoA)
Enzymes [BR:
bapk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KIMH_12420 (rpoA)
Transcription machinery [BR:
bapk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KIMH_12420 (rpoA)
DNA repair and recombination proteins [BR:
bapk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KIMH_12420 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
BDR55131
UniProt:
A0ABN6SJJ8
LinkDB
All DBs
Position
complement(1546491..1547486)
Genome browser
AA seq
331 aa
AA seq
DB search
MLIAQRPTLTEEVVNAQRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVRISGAL
HEFTTLPGVEEDVTEILLNIKNIVLTSEYDEPVVMYLRKSGEGEAKAGDITPPAGVTVAN
PDLHIATLAEDGELEIEFTVERGRGYVQAQLNKQDSDEIGRIPVDSIYSPVLKVSYKVEA
TRVEQRTDFDKLILDVETKPAISPRDAVASAGSTLVELFGLCRDLNVQAEGVEIGPEPVA
EQTDPEMNVPIEDLNLTQRSYNCLKREGIHTIGELVARTEQDLLDIRNFGMKSIDEVKEK
LEGMGLSLKPSPIGFDTANLEGGTFFSPEDQ
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgcttattgcacagcgtccgacacttactgaagaagttgtcaatgcccagcgctcacgg
ttcactatcgaacccctggagcctgggtttggctatactctcggcaactctctgcgtcgt
accctgctgagctcgattccgggagcggccgttacctcggttcgtatttccggtgccctg
cacgaattcaccacgcttcccggcgtggaagaagacgtaacggaaatcctgctcaacatc
aagaacatcgtgctcaccagtgagtatgacgagccggtcgtcatgtatttgcgtaagagc
ggcgaaggtgaagccaaggctggggacattacccctcctgctggtgtcaccgttgccaat
cccgacctacatattgcgactttggccgaagacggagaactcgaaatcgagttcactgtt
gagcgtggccgcggctacgtgcaggctcagctcaataagcaggattccgatgagattggc
cgtattccagtcgactccatctactctcctgtgctcaaggtcagctacaaggtcgaggct
acgcgtgttgaacagcgtaccgactttgacaagctgattcttgacgttgaaaccaagccg
gctatttcgccgcgcgatgctgtggcctccgcgggctctaccttggtagagctcttcggt
ctgtgccgcgacctcaacgtacaggcagaaggtgttgagattggcccagaaccagttgca
gaacaaacagaccctgagatgaatgtcccaattgaggacctcaacctcactcagcgttct
tacaactgcctcaagcgtgaaggtattcacactattggtgagcttgttgctcgtaccgag
caggatttgctcgacattcgcaactttggcatgaagtctatagacgaagtgaaggagaag
ctcgaaggaatgggcctctctctcaaaccgtcaccaattggcttcgataccgccaacctt
gagggtggaaccttcttctcgccggaggatcagtga
DBGET
integrated database retrieval system
