Bacillus sp. PGP15: MU858_21990
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Entry
MU858_21990 CDS
T11748
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bapp Bacillus sp. PGP15
Pathway
bapp03030
DNA replication
bapp03430
Mismatch repair
bapp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bapp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MU858_21990 (holA)
03430 Mismatch repair
MU858_21990 (holA)
03440 Homologous recombination
MU858_21990 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bapp03032
]
MU858_21990 (holA)
03400 DNA repair and recombination proteins [BR:
bapp03400
]
MU858_21990 (holA)
Enzymes [BR:
bapp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MU858_21990 (holA)
DNA replication proteins [BR:
bapp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MU858_21990 (holA)
DNA repair and recombination proteins [BR:
bapp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MU858_21990 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
SH3_Tf2-1
Motif
Other DBs
NCBI-ProteinID:
UPL43388
LinkDB
All DBs
Position
complement(4217693..4218703)
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AA seq
336 aa
AA seq
DB search
MSDIHKKIKKKQFSPLYLLYGTEAFFINETIKLITTEALEEEDREFNVVTYDLEEAYLED
VVEDARTLPFFGERKVLLIKSPLFLTSQKEKLEQNIKILEEYIGEPSPFSILVFVAPYEK
LDERKKITKLLKKTADVVEANAMQVQDVQKWVVARADEVHVHIDHAAVSLLLELVGSNVT
MLAKEMDKLTLYVGMGGEVTQKLVAELVPKSVEQNVFALTEKVVKKDIAGAMQILDGLFT
QQEEPIKLLALLVSQFRLLHQVKELQQRGYGQNQIASHIGVHPYRVKLAMNQTKFFSFEE
LKKVIIELAEADYSMKTGKMDKKLVLEFFLMRLNHM
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatatacataaaaagattaaaaagaagcagttttcgccgttgtatttactgtat
ggaacggaagcgttttttataaatgaaacgataaagcttattacgacagaagcgcttgaa
gaggaagatcgcgagtttaatgttgtgacatatgatttagaagaagcgtatttagaagat
gtggttgaggatgcacgtacacttcctttttttggagagcgtaaagtactattaataaaa
tcaccactatttctaacttcacaaaaagaaaagttagaacaaaatataaaaattttagaa
gaatatattggggagccttctcctttttctattcttgtttttgttgcgccttacgaaaag
cttgatgaacgaaaaaaaattacaaaactattaaagaaaacagcggatgtagtagaagcg
aatgcgatgcaagtgcaagatgttcagaagtgggttgtggctcgtgcggacgaagtacat
gtacatattgatcatgcggctgttagtttgttgctagagcttgtgggaagtaatgtaacg
atgttggcgaaggaaatggacaagttaacgttatacgttggtatgggcggagaggttacc
caaaaacttgttgcggagcttgtgccaaaatcagttgaacaaaatgtgtttgctttgaca
gaaaaagtggtaaaaaaagatattgcgggcgcaatgcaaattttggatggattatttacg
cagcaagaggaaccgattaaactacttgcattattagtaagtcaattccgtttgctccat
caagtgaaagagttacagcaacgtggttatggacagaatcaaatcgcgtctcatattggt
gtgcatccctatcgtgtaaagttagcgatgaatcaaacgaagtttttctcttttgaagaa
ttaaaaaaagtgattatagaattagcggaagctgattatagtatgaagacaggaaaaatg
gataagaaacttgtgcttgagtttttcttaatgcggttaaatcatatgtaa
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