Bacillus sp. PGP15: MU858_26085
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Entry
MU858_26085 CDS
T11748
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bapp Bacillus sp. PGP15
Pathway
bapp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bapp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MU858_26085 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bapp03400
]
MU858_26085 (uvrB)
DNA repair and recombination proteins [BR:
bapp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MU858_26085 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MU858_26085 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_7
AAA_30
AAA_19
AAA
AAA_22
DUF1280
UFL1
UvrD-helicase
AAA_16
HH_RND_rel
Motif
Other DBs
NCBI-ProteinID:
UPL44147
LinkDB
All DBs
Position
complement(4971641..4973617)
Genome browser
AA seq
658 aa
AA seq
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MERQFEIVSAYSPQGDQPVAIEKLVEGINSGKKKQVLLGATGTGKTFTISNVIKEVQKPT
LVMAHNKTLAGQLYSELKDFFPNNAVEYFVSYYDYYQPEAYVPQTDTFIEKDAQINDEID
KLRHSATSALFERDDVIIVASVSCIYGLGSPEEYRELVVSLRVGMEKDRNQLLRELVDVQ
YGRNDIDFKRGTFRVRGDVVEIFPASLDEHCIRIEFFGDEIDRIREVNALTGEVLAERDH
VAIFPASHFVTREEKMKVAIENIEKELEERLKELNDNGKLLEAQRIEQRTRYDLEMMREM
GFCSGIENYSRHLTLRPAGATPYTLLDYFPKDFLIVMDESHVSVPQVRAMYNGDQARKQV
LVDHGFRLPSALDNRPLTFDEFEEKTNQVIYVSATPGPYELEQSPEVIEQIIRPTGLLDP
PIDIRPIEGQIDDLLGEIQDRIAKNERVLITTLTKKMSEDLTDYLKDVGIKVNYLHSEIK
TLERIEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNENGRVIMYADRITRSMGIAIEETQRRRTIQEAYNKEHGITPKTIQKGVRDVIRATT
AAEETETYEAAPAKKMTKKEREKTIAKMEAEMKEAAKALDFERAAELRDLLLELKAEG
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgtcaatttgaaattgtctcagcgtattccccacaaggtgatcagccggtagct
atagagaagcttgtagagggaattaatagtggaaagaaaaagcaagtgttgcttggagcg
acaggaacgggtaagacatttacgatttcaaatgtcattaaagaagtgcagaagccaaca
cttgtcatggctcataataaaacgttagcaggacagttatatagtgagctgaaagatttt
ttcccgaataatgcagttgaatattttgttagttattacgattattatcagccagaagcg
tatgtgccgcaaacagatacgtttattgaaaaagatgcgcaaattaatgatgaaattgat
aaattgcgtcactcagcaacgtccgcattatttgaacgggacgatgtaattatcgttgcg
agtgtttcgtgtatatatggtttaggttctccagaagaataccgcgagctagttgtttca
cttcgagttggtatggaaaaggaccgcaatcaattgcttcgtgagcttgttgatgtgcag
tatggacgtaatgatattgatttcaagcgtggtacattccgtgtgcgtggagatgtagtt
gaaattttcccggcatcacttgacgagcattgtattcgaattgagtttttcggtgatgaa
atcgatcgtattcgtgaagtaaatgcgttaacaggtgaagtattagcagaacgtgatcat
gtagcaatcttcccggcatctcacttcgttacacgtgaggaaaaaatgaaggtcgctatt
gaaaatatcgaaaaagaattagaagagcgtttaaaggaattaaatgataatggcaagctg
ttagaagcgcagcgtatagaacaacgtacacgttatgatttagaaatgatgcgcgagatg
ggcttttgttcagggattgaaaactattcccgtcatttaacacttcgtccggcaggtgca
acgccgtatacgctattagactatttcccgaaagatttcttaatcgttatggatgagtca
cacgtatccgtgccacaagtaagagcgatgtataacggggaccaagcacgtaaacaagtg
cttgtagatcatggattccgtttgccatcagctttagataatagaccgctcacatttgat
gagtttgaagagaaaacgaatcaagttatttacgtttcagcaacgccaggaccgtacgag
ttagagcagtcaccagaagtaatcgaacaaattattcgtccaacagggcttttagatcca
ccaattgatatacgaccaatcgaaggtcaaattgatgatttattaggagaaattcaagat
cgcattgcaaaaaatgaacgtgtattaattacgactttaacgaagaagatgtcagaggat
ttaacggattacttaaaagatgtaggaattaaagtgaactatcttcactctgaaattaaa
acgttagaacgtattgaaattatccgtgaccttcgccttggtaagtttgatgtacttgtc
ggtattaacttattacgagaaggattggatattccagaagtatcacttgtcgctatttta
gatgctgataaggaaggattcttgcgctcagagcgttcattaattcaaacaatcggtcgt
gcggcacgtaatgaaaacggccgcgtaattatgtacgcagatcgtataacaagatcgatg
ggaattgcgattgaagaaacgcaacgtcgtcgtactatacaagaagcttacaataaagag
catggtattacgccgaaaacgattcaaaaaggcgtgcgtgatgtgatacgtgcaacgaca
gctgctgaagaaacagaaacgtatgaagcagcgccagccaagaagatgacgaaaaaagag
cgtgaaaagacaattgcgaagatggaagcagagatgaaagaagcagcaaaagcgttagat
ttcgagcgtgcagctgaattgagagatttactattagaattaaaagcggaagggtga
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