Buchnera aphidicola USDA (Myzus persicae): BUMPUSDA_CDS00221
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Entry
BUMPUSDA_CDS00221 CDS
T03022
Symbol
trub
Name
(GenBank) Trub
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bapu
Buchnera aphidicola USDA (Myzus persicae)
Brite
KEGG Orthology (KO) [BR:
bapu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bapu03016
]
BUMPUSDA_CDS00221 (trub)
Enzymes [BR:
bapu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BUMPUSDA_CDS00221 (trub)
Transfer RNA biogenesis [BR:
bapu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BUMPUSDA_CDS00221 (trub)
Prokaryotic type
BUMPUSDA_CDS00221 (trub)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AHG60013
UniProt:
W0P4K7
LinkDB
All DBs
Position
complement(416374..417306)
Genome browser
AA seq
310 aa
AA seq
DB search
MFFHKKRNVHGLILLDKPSGMSSNQALQKVKSIFNAKKAGYIGTLDPLATGMLPICFGEC
AKFSSYLTESNKRYHVIAKLGEKTSTSDSYGIVIEKRPILFTNFQLNASIKELTGLINQI
PSMYSAIKYNGIPLYKYARQGLNIKRKIRKVMIYSIDSVIQKDNLIEFTVLCSKGTYIRT
LIEDLGEKLGCGAHVIFLRRLQVASYSYTKLVKITDLYKLLNKNNTKNINFFQKIDNLLM
PIDSPVSFLPEVYLSCTESYHFKLGQIVNYQSNIKNSLVRVIEKKDKKFIGLGRINTEAL
LIPYRLVSIY
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgttttttcataaaaaacgcaatgttcatgggttaatattattagataaaccttccggt
atgtcctctaatcaggctttacagaaagtaaaatctatttttaatgcaaaaaaagcagga
tatattggaactttagatcctttagcaactggaatgttacctatttgttttggagaatgt
gcaaaattttctagttatttgacggaatctaataagcgttaccatgttattgctaaatta
ggagaaaaaacatctacatctgattcctatggaatagtgatagaaaaacgtcctattttg
tttactaattttcagctgaatgcatctataaaagaacttactggtttaattaatcaaatt
ccttccatgtattcagcgattaaatataatggtattcctttatataaatatgcgcgtcaa
ggattaaatataaaacgtaaaataagaaaagtaatgatatatagtattgattctgttatt
caaaaagataatttaattgaatttacagtattatgttcaaaaggcacatatattagaact
cttattgaagatttaggggaaaaattaggttgtggtgctcatgtaatttttttacgtcgt
ttacaagttgcatcctatagttatacgaaattagtcaaaattactgatttatataaattg
ttaaacaaaaataatactaaaaatattaatttttttcaaaaaatagataatttattaatg
cctatagatagtcctgtatcttttttaccagaagtatatctttcttgtacagaatcatat
cattttaaacttggacagatagtaaattatcaatctaatattaaaaatagtttggtacgt
gtaatagaaaaaaaagataaaaaatttattggattaggaagaattaatacagaagcatta
ttaataccatatcgattagtttctatatactaa
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