Buchnera aphidicola USDA (Myzus persicae): BUMPUSDA_CDS00395
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Entry
BUMPUSDA_CDS00395 CDS
T03022
Symbol
trua
Name
(GenBank) Trua
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bapu
Buchnera aphidicola USDA (Myzus persicae)
Brite
KEGG Orthology (KO) [BR:
bapu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bapu03016
]
BUMPUSDA_CDS00395 (trua)
Enzymes [BR:
bapu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BUMPUSDA_CDS00395 (trua)
Transfer RNA biogenesis [BR:
bapu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BUMPUSDA_CDS00395 (trua)
Prokaryotic type
BUMPUSDA_CDS00395 (trua)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AHG60173
UniProt:
W0P548
LinkDB
All DBs
Position
215849..216649
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AA seq
266 aa
AA seq
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MIKNNIKRFALGVEYDGSFYHGWQSQKTVPTIQEEVEKALSIIANHKIDVICAGRTDAGV
HSIGQVIHFSTTTIRKKSSWILGTNSYLSKYISIIWIKEVSEHFHARYSAITRSYRYIIY
NYPFRSAIFQDKSNHVYKILNIDKMNFEAQFLLGEHDFTSFRGFNCQSHSPFRKIIKLNI
WRHEAWVIIDIVANSFLYHMVRNIVGTLIEIGLSKKKKFWMKELLQRKNRSDAGSTAPAK
GLYLVFVQYPLYFNLPNSSCDSIFLC
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaataatattaaaagatttgcattaggagtcgaatatgatggaagtttttat
catggatggcagagtcaaaaaacagtacctactattcaagaagaagtagaaaaagcttta
tctataattgctaatcataagatagatgtaatatgtgcaggtcgtactgatgctggggta
catagtataggacaagtcattcattttagtactacaactattcgtaaaaaatcatcttgg
atattaggaactaatagctatttatctaaatacatttctattatatggatcaaagaagtt
tcagagcattttcatgcacgttatagcgctattacacgttcttatcgttatataatatat
aattatccttttcgatctgctatttttcaggataaatcaaatcatgtgtataaaatttta
aatattgataaaatgaattttgaagctcaatttttattaggagaacatgattttacatct
tttcgaggttttaattgtcaatcacattctcctttcagaaaaatcataaaattaaatatt
tggcgtcatgaagcttgggtgataattgatattgtagctaattcttttttatatcatatg
gttcgaaatattgttggcaccttaattgaaattggtctttctaaaaaaaaaaaattttgg
atgaaagaattattacaaagaaaaaatagaagtgatgcaggatctacagctccagctaaa
ggtttatatttagtatttgtacaatatcctttatattttaatttaccaaactcgtcatgt
gattctatttttttatgttaa
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