Buchnera aphidicola USDA (Myzus persicae): BUMPUSDA_CDS00553
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Entry
BUMPUSDA_CDS00553 CDS
T03022
Symbol
hupa
Name
(GenBank) Hupa
KO
K05787
DNA-binding protein HU-alpha
Organism
bapu
Buchnera aphidicola USDA (Myzus persicae)
Brite
KEGG Orthology (KO) [BR:
bapu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bapu03032
]
BUMPUSDA_CDS00553 (hupa)
03036 Chromosome and associated proteins [BR:
bapu03036
]
BUMPUSDA_CDS00553 (hupa)
03400 DNA repair and recombination proteins [BR:
bapu03400
]
BUMPUSDA_CDS00553 (hupa)
DNA replication proteins [BR:
bapu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BUMPUSDA_CDS00553 (hupa)
Chromosome and associated proteins [BR:
bapu03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BUMPUSDA_CDS00553 (hupa)
DNA repair and recombination proteins [BR:
bapu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BUMPUSDA_CDS00553 (hupa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
VWA_3
Motif
Other DBs
NCBI-ProteinID:
AHG60328
UniProt:
W0P5K4
LinkDB
All DBs
Position
complement(35927..36199)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTQLINIISKKSNLSKIQAKSTLEATLSTIIESLKQGESVQIVGFGTFKVNLRASRTG
RNPQTGKEIQIPATKVPSFTSGKTLKNAIK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaactcaattaattaatatcatttctaaaaaatctaatttatctaaaatacaa
gctaaatctactttagaagcaacactatctactattatagaatctttaaaacaaggagaa
tctgtacaaatagttggatttggtacttttaaagttaacttaagagcatctcgtacagga
cgaaaccctcaaacaggaaaagaaatacaaattcccgctactaaagttcctagttttaca
tccggtaaaacattaaaaaatgcaattaaatga
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