Buchnera aphidicola W106 (Myzus persicae): BUMPW106_CDS00288
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Entry
BUMPW106_CDS00288 CDS
T03023
Symbol
ihfb
Name
(GenBank) Ihfb
KO
K05788
integration host factor subunit beta
Organism
bapw
Buchnera aphidicola W106 (Myzus persicae)
Brite
KEGG Orthology (KO) [BR:
bapw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bapw03032
]
BUMPW106_CDS00288 (ihfb)
03036 Chromosome and associated proteins [BR:
bapw03036
]
BUMPW106_CDS00288 (ihfb)
03400 DNA repair and recombination proteins [BR:
bapw03400
]
BUMPW106_CDS00288 (ihfb)
DNA replication proteins [BR:
bapw03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BUMPW106_CDS00288 (ihfb)
Chromosome and associated proteins [BR:
bapw03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BUMPW106_CDS00288 (ihfb)
DNA repair and recombination proteins [BR:
bapw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BUMPW106_CDS00288 (ihfb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF4609
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AHG60655
LinkDB
All DBs
Position
complement(342318..342602)
Genome browser
AA seq
94 aa
AA seq
DB search
MTKSELFEKISKKKIHISNKIIKCAIKEMLEHMTMSLEKGQRIEIRGFGSFSLHYRPSRI
GRNPKTGEIVRLNEKYVPYFKPGKQLRNRTNIYK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtcagaattatttgaaaaaatttctaaaaaaaaaattcatatttcaaataag
ataataaaatgtgctataaaagaaatgttagaacacatgacgatgtcattagaaaaaggt
caaagaattgaaattcgagggtttggaagtttttctttgcattatcgtccctctcgtatt
ggtagaaatcctaaaactggagaaatcgtacgattaaatgaaaaatacgtaccttatttt
aaaccaggcaaacaattacgtaatcgaactaatatatataaatag
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