Buchnera aphidicola W106 (Myzus persicae): BUMPW106_CDS00338
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Entry
BUMPW106_CDS00338 CDS
T03023
Symbol
rnc
Name
(GenBank) Rnc
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bapw
Buchnera aphidicola W106 (Myzus persicae)
Pathway
bapw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bapw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BUMPW106_CDS00338 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bapw03019
]
BUMPW106_CDS00338 (rnc)
03009 Ribosome biogenesis [BR:
bapw03009
]
BUMPW106_CDS00338 (rnc)
03036 Chromosome and associated proteins [BR:
bapw03036
]
BUMPW106_CDS00338 (rnc)
Enzymes [BR:
bapw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
BUMPW106_CDS00338 (rnc)
Messenger RNA biogenesis [BR:
bapw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BUMPW106_CDS00338 (rnc)
Ribosome biogenesis [BR:
bapw03009
]
Eukaryotic type
90S particles
RNase
BUMPW106_CDS00338 (rnc)
Prokaryotic type
rRNA processing factors
BUMPW106_CDS00338 (rnc)
Chromosome and associated proteins [BR:
bapw03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
BUMPW106_CDS00338 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
RecX_HTH3
Motif
Other DBs
NCBI-ProteinID:
AHG60702
LinkDB
All DBs
Position
complement(284340..285020)
Genome browser
AA seq
226 aa
AA seq
DB search
MNYIITKKIQKVLGYTFTHKDLLRQALTHRSASSKHNERLEFLGDSILSFVIANALYQHF
PYIDEGDMSRMRATLVRGNTLAEIAYEFDLGEYLKLGQGELKSGGFRRESILANTVEALI
GSIYLDSNIKTVEELILKWYEKRLEKISPGDTQKDPKTRLQEYLQSKHLSLPTYFIVEIY
GEAHNQLFTIHCKISVISEYLIGTGSSRRKAEQDAAQKALIKLGVE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaactatatcataacaaaaaaaatacaaaaggtgctgggatatacttttactcataaa
gatcttttaagacaagcattaacacatcgaagcgcaagtagcaaacataatgaaagatta
gaatttttaggagattctatactaagttttgtaatagctaatgctttatatcaacatttt
ccatatattgatgaaggtgatatgagtcgtatgagagctactttagttcgcggtaatact
ttagcagaaattgcatatgaatttgatttgggagaatatttaaaattaggacaaggagaa
ctaaaaagtggaggtttccgtcgcgaatctattttagcaaatactgtagaagctcttatt
ggaagcatttatttagatagtaacataaaaacagtagaagaattaatattaaaatggtat
gaaaaacgtttagaaaaaataagtcctggagatacgcaaaaagatcccaaaacacggtta
caagaatatttacagtcaaaacatttatctttacccacatatttcatagttgaaatatat
ggagaagctcataatcaattatttactattcattgtaaaattagtgttatttcagaatat
ttaattggtaccggttcgagtagaagaaaagctgaacaagatgctgcacaaaaagcatta
attaaattaggtgtagagtga
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