Buchnera aphidicola W106 (Myzus persicae): BUMPW106_CDS00458
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Entry
BUMPW106_CDS00458 CDS
T03023
Symbol
nfo
Name
(GenBank) Nfo
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
bapw
Buchnera aphidicola W106 (Myzus persicae)
Pathway
bapw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bapw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BUMPW106_CDS00458 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bapw03400
]
BUMPW106_CDS00458 (nfo)
Enzymes [BR:
bapw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
BUMPW106_CDS00458 (nfo)
DNA repair and recombination proteins [BR:
bapw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BUMPW106_CDS00458 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AHG60811
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All DBs
Position
144319..145161
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AA seq
280 aa
AA seq
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MKYIGAHISSSGGLEKAVLRAFKIRATAFSFFTRNQRQWTTPPLTEKKIYNFKQSCIKYK
FTPQQILPHSSYLINLGHPIDYLLEKSRNAFIDEMIRCSQLGLIFLNFHPGSHLNKITES
DCLLRISESINIALKNTKNIIAVIENTAGQGTNVGYCFEHLSEIIKNVDDKARVGVCIDT
CHLFVSGYDLRTLDNCEKTFKKFNDLIGFKYLKGIHLNDSKKIFNSRVDRHENLGIGEIG
ELAFKWIIKNKNFYNIPMILETVDSTLWEKEIAWLRSQKI
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatattggtgcgcatattagttcttcaggcggtttagaaaaagctgttcttcgt
gcttttaaaataagagcaacagctttttctttttttactcgaaatcaacggcaatggacc
acccctccattaactgaaaaaaaaatatataattttaaacaatcttgtattaagtataaa
tttacacctcaacaaattttacctcatagcagttatttaattaatttaggtcatcctatt
gattatttattagaaaaatctcgtaatgcttttatagatgaaatgattcgctgtagtcaa
ttaggtttaatatttttaaattttcatccgggtagtcatttaaataaaatcactgaaagc
gattgtttattaagaatttctgaatccattaatatagccttaaaaaatacaaaaaatata
attgcagtaatagaaaatactgcaggacaaggaacaaatgttggatattgttttgaacat
ctatctgaaattattaaaaacgttgatgataaagctagggtaggagtttgtattgataca
tgtcatttatttgtttctggatatgatttacgtactttagataattgtgaaaagacattt
aaaaagtttaatgatttgataggatttaaatatttaaaaggtattcatttaaatgattct
aagaagatatttaatagtcgagttgatcgacatgagaacttaggaatcggtgagatagga
gaattagcttttaagtggattatcaaaaataaaaatttttataatattcctatgatttta
gaaacagttgattcgacactgtgggaaaaagaaattgcctggttaagatcgcaaaaaata
taa
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