Buchnera aphidicola W106 (Myzus persicae): BUMPW106_CDS00576
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Entry
BUMPW106_CDS00576 CDS
T03023
Symbol
gyrb
Name
(GenBank) Gyrb
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bapw
Buchnera aphidicola W106 (Myzus persicae)
Brite
KEGG Orthology (KO) [BR:
bapw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bapw03032
]
BUMPW106_CDS00576 (gyrb)
03400 DNA repair and recombination proteins [BR:
bapw03400
]
BUMPW106_CDS00576 (gyrb)
Enzymes [BR:
bapw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BUMPW106_CDS00576 (gyrb)
DNA replication proteins [BR:
bapw03032
]
Prokaryotic type
DNA Topoisomerases
BUMPW106_CDS00576 (gyrb)
DNA repair and recombination proteins [BR:
bapw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BUMPW106_CDS00576 (gyrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
GyrB_insert
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AHG60926
LinkDB
All DBs
Position
complement(8864..11275)
Genome browser
AA seq
803 aa
AA seq
DB search
MTNIYDSSNIKILRGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALSGYCKEII
IIIHSDNSVSVKDNGRGIPTDIHPEENISAAEVIMTVLHAGGKFDNSSYKISGGLHGVGI
SVVNALSEKLELIIYKNKKKYQQIYRNGKPDHPLSIIGKSDTTGTYIRFWPSYKTFTNNI
QFQYEILSKRLRELSFLNANISIHLKDNRTNIKNHYQHKGGIKAFIKFLNINQILIHSRI
FYFRSMRNQIELEVAMQWTNSHKENILCFTNNIPQKDGGTHLAGFRSGLTRTLNLHIERE
GYNKKNKTTIIGEDAREGLTAIISIKIPDPKFSSQTKDKLVSSEARSIIESLINENLIEY
LLENPTDAKSIIQKVITAAKTREAARRAREINKKKGILDLGALPGKLSDCQENDPKLSEI
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKSKFEKMLLSQELSSLITALGCGIGK
NEYNIDKLRYNYIIIMTDADVDGAHIRTLLLTFFYRQLPELIEKGHIYIAQPPLYKVKKG
KKEEYIKNDQDMNKYQIKNALKDLMLKSNNNPDINKNIQKFKKMISEYNSILIIMEKNKH
YFPKVILNELIYHPHLDNLNNINTVEIWINTLSDKLNKKDYNNNSYSTEIKKNIHQNIFE
PTIKISRYSYHVKYEFKADFFKSKEYFLITNLGKIFQNFFIHEVFVEKTGSSYKIDNIKN
TLEWLIQQSKRGLFIQRYKGLGEMNPEQLWNTTMNPETRNMLQVSIQDAISANNLFNTLM
GDAVEPRRKFIEKNALKAENIDI
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatatatatgattcttctaatataaaaattttaagagggctcgatgcggttcgt
aaacgaccaggtatgtatattggagatacagatgatggaagtggattgcatcacatggtt
tttgaagttgtagataattctattgatgaagcattatcaggttattgtaaagaaattata
attattattcattcagataattctgtatctgttaaagataatggaagaggtattcctact
gatattcatcctgaagaaaatatttcagctgcagaagtgattatgacagtactacatgca
ggaggtaaatttgataattcttcatataaaatatcaggtggattacatggtgtaggaata
tcagttgtaaatgctctgtcagaaaaattagaacttataatttataaaaataaaaaaaaa
tatcaacaaatatatagaaatggaaaaccagatcaccctctttctattattgggaaaagt
gatactacaggtacttatataagattttggcctagttataaaacatttactaataacatc
caatttcaatatgaaattttgtctaaaagattacgcgaactatcttttctaaatgcaaat
atttcaattcatctaaaagataacagaactaatataaaaaaccattatcaacataaagga
ggcattaaagcttttattaaattcctaaatataaatcaaatactaattcattcacgcatt
ttttattttcgatctatgagaaatcaaatagaattagaagttgctatgcaatggactaat
tcacataaagaaaatatattatgtttcactaataatataccgcaaaaagatggaggaaca
catttagcaggttttcgttctggtctaactcggactttaaacctccatatagaaagagaa
ggatataataaaaaaaataaaacaactattataggtgaagatgcacgtgaaggattaaca
gctattatatcaattaaaatacctgatccaaagttctcttctcaaactaaagataagtta
gtatcttctgaagcaagatcaattatagaatcattaattaacgaaaatcttattgaatat
cttttagaaaatcccactgatgccaaatctattattcaaaaagtcatcactgctgcaaaa
acaagagaagctgcacgacgtgctagagaaataaacaaaaaaaaaggaatattagattta
ggagctttacctggaaaattatctgattgtcaagaaaatgatcctaaactttcagaaatt
tatttagttgaaggtgattcagctggtggatccgcaaaacaaggaagaaatcgaaaaaat
caagctatacttcctttaaaaggaaaaatattaaatgtcgaaaaatcaaaatttgaaaaa
atgcttttatctcaagaattatcttctctaataactgcattaggctgtggaattggtaaa
aacgaatataacatagataaattaagatataactatattattatcatgactgatgcggat
gtagacggtgcacatattcgaacattacttttaacttttttttatcgtcaattaccagaa
ttaattgaaaaaggacatatttatattgcacaacctccattatacaaagtaaaaaaagga
aaaaaagaagaatatattaaaaatgatcaagacatgaataaatatcaaattaaaaatgct
ctaaaagatttaatgttaaaaagtaataataatcctgatattaataaaaacatacaaaaa
tttaaaaaaatgatatctgaatataattcaattctaattatcatggaaaaaaacaaacat
tactttccaaaagtaattttaaatgaacttatttatcatcctcatttagataatttaaat
aatattaatacagtagaaatttggataaatactttatcagataaattgaataaaaaagat
tataataataattcttattctacagaaataaaaaagaacatacatcaaaatatatttgaa
cctactataaaaatctctagatactcatatcatgttaaatatgaatttaaagcagatttt
tttaaaagtaaagaatatttcttgattactaatttaggtaaaatatttcaaaattttttt
atacatgaagtttttgtagaaaaaacaggatctagctataaaatagataatataaaaaac
actttagaatggttaatccaacaatctaaacgtggtttatttatacaacgttataaagga
ttaggagaaatgaatccagaacaattatggaatacaaccatgaatcctgaaactagaaat
atgttacaagttagtattcaagatgcaatctctgcgaataatttatttaataccttaatg
ggagatgcagttgaacctagacgaaaatttatagaaaaaaatgctttaaaagcagaaaat
attgatatatga
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