Bacillus velezensis CAU B946: BACAU_3644
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Entry
BACAU_3644 CDS
T01692
Symbol
deaD3
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
baq
Bacillus velezensis CAU B946
Pathway
baq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BACAU_3644 (deaD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baq03019
]
BACAU_3644 (deaD3)
03009 Ribosome biogenesis [BR:
baq03009
]
BACAU_3644 (deaD3)
Enzymes [BR:
baq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BACAU_3644 (deaD3)
Messenger RNA biogenesis [BR:
baq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BACAU_3644 (deaD3)
Ribosome biogenesis [BR:
baq03009
]
Prokaryotic type
rRNA helicases
BACAU_3644 (deaD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
CMS1
UvrD-helicase
NAT10_TcmA_helicase
Flavi_DEAD
3H
Motif
Other DBs
NCBI-ProteinID:
CCF07178
LinkDB
All DBs
Position
complement(3839390..3840829)
Genome browser
AA seq
479 aa
AA seq
DB search
MNEFNEYAISPEIRRALNGLQYTEPTEVQRRVIPAALQKKDLVVKSQTGSGKTAAFGIPI
CELAEWEENKPQALILTPTRELAAQIKEDITNIGRFKRIKATAVFGKASFDKQKTELKQK
SHVVAGTPGRVLDHIEKGTLPLERLAYVVIDEADEMLNMGFIEQVEAIIQHLPKNRVTML
FSATLPDDVEKLSRTYMKDPELIEVKAEGLTTKDIEHFVTRTEEEDKSSLLRDVLITENP
DSCIIFCRTKERVIQLTDELDRLGYPCDKIHGGMVQEDRFDVMNEFKRGEFRYLIATDVA
ARGIDIENISLVINYDIPLEKESYVHRTGRTGRAGHRGLAVTFVTPSESRFLNDIETYIG
FRIQKREAPSEKETAERKAAFAEKLNARPDVKTDKSEQLNKDIMKLYFNGGKKKKLRAVD
FVGTIAKIDGVSADDIGIITILDNASYVEILNGKGPHVLDIMKNTTVKGKKLKVHKAKK
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtttaatgaatatgcgatcagccccgagatccgacgggcgctgaatggcttg
caatacaccgagccgactgaagtgcagcggcgcgtcatccccgccgcgctgcaaaaaaaa
gacctcgttgtcaaatcgcagacgggcagcggcaaaaccgcagctttcggcattccgatc
tgcgagcttgcggaatgggaggaaaacaaaccgcaggcgctgattttaacgccgacccgc
gagcttgcggcgcagattaaagaagatatcacgaatatcggccgtttcaaacggataaaa
gccacggcggttttcggaaaagcttcttttgacaaacagaaaaccgaactgaagcaaaaa
agccacgtcgttgccggaacgccgggacgtgtgcttgatcatatagaaaaagggacgctg
ccgctcgaacggctggcgtatgtggtgattgacgaagcggatgaaatgctgaatatggga
tttattgaacaggtggaagccatcattcagcatctgccgaaaaacagagtcaccatgttg
ttttcagcgacgctgccggatgacgtcgagaagctgagccgcacatatatgaaagaccct
gaattgattgaagtaaaagcggaaggcctgacgacaaaagacattgagcattttgtcacc
agaacagaagaagaggataaatcatctttgctgcgtgatgtcctgatcaccgaaaacccg
gacagctgcatcatattctgccggacaaaagaaagagttatccagttaaccgatgagctg
gacaggctgggctacccttgcgataaaattcacggcggaatggtgcaggaagaccgcttt
gacgtcatgaatgaattcaagcgcggcgagttccgctatctcattgcgaccgacgttgcc
gccagaggaattgatatcgaaaacatcagcctcgtcatcaattatgatattccgcttgaa
aaagaaagctatgtgcaccgcaccggcagaacggggcgcgccggacaccgcggactggcc
gttacgtttgtgacgccttctgaatcgcgttttctgaatgacattgagacatatatcggt
ttccgcatccaaaagcgggaggcgccgtccgagaaagaaacagcggaacggaaagcggct
tttgcggaaaaactgaacgcccgccccgatgtcaaaacagacaaaagcgaacagttaaac
aaagacatcatgaagctgtactttaacggcgggaaaaagaaaaaactcagagcggtcgat
tttgtcgggacgatcgcgaaaatcgacggcgtttcagccgatgatatcgggattatcacg
attctggacaacgcatcatacgtcgaaattctgaacggaaaaggcccgcacgttcttgac
atcatgaaaaatacgacggtcaaaggcaaaaaactgaaagtccataaagccaagaaataa
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