Bifidobacterium aquikefiricola: QN215_02400
Help
Entry
QN215_02400 CDS
T10738
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
baqk Bifidobacterium aquikefiricola
Pathway
baqk03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
baqk00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
QN215_02400 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baqk03019
]
QN215_02400 (rnc)
03009 Ribosome biogenesis [BR:
baqk03009
]
QN215_02400 (rnc)
03036 Chromosome and associated proteins [BR:
baqk03036
]
QN215_02400 (rnc)
Enzymes [BR:
baqk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
QN215_02400 (rnc)
Messenger RNA biogenesis [BR:
baqk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QN215_02400 (rnc)
Ribosome biogenesis [BR:
baqk03009
]
Eukaryotic type
90S particles
RNase
QN215_02400 (rnc)
Prokaryotic type
rRNA processing factors
QN215_02400 (rnc)
Chromosome and associated proteins [BR:
baqk03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
QN215_02400 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
XDS44999
UniProt:
A0AB39U7P3
LinkDB
All DBs
Position
complement(571504..572337)
Genome browser
AA seq
277 aa
AA seq
DB search
MSQQERMSSPEANGNSDRLNATVPVDSAEQAHDRIEQPKAPTGPDALLEALGCTVSPELL
VHALTHRSFANEHHGLPNNERLEFLGDAVLELVSTETLFSIHPDMNEGQLAKMRAKAVSE
EALSAIARTKLKLGPYILLGVGESASGGADKSSILCDTVEALIGAVFVEHGIEGGRKVVH
RLVDDTLAEVATEGPALDWKTSLTVKAHHMDLGEPHYRMKVSGPEFQQIFTAEVMLGDST
EVLASATGSSKRKAQLAAAEVAWKILDAKKSQQPSQA
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagcaggaacggatgtcatcaccagaagccaacggaaactcggatagattgaat
gccacggttcccgttgactctgcagaacaagcacacgaccgtatcgagcagccgaaggct
cccacagggcctgatgcgcttctggaggcgctgggatgcaccgtgagtccagaattgctg
gttcatgccctgacccatcgttcattcgccaacgaacaccatggtctgccgaataatgaa
cgactcgaatttcttggcgatgccgtgcttgaactcgtatccaccgaaacgctgttcagc
attcatcctgacatgaatgaaggtcagcttgccaagatgcgagcaaaagccgtttccgag
gaagcgttgtctgcaatagcacgtaccaagctgaaacttggaccgtacattcttcttgga
gtaggtgagtcggcaagcggcggcgcggacaagtcatccattctctgcgacacggtcgag
gccttgattggtgccgtgttcgtcgagcatggcatcgaaggcggccgcaaggtcgttcat
cgactggttgacgacaccctggccgaagttgccaccgaagggcccgcactcgactggaaa
acttcgctgaccgtgaaggctcatcatatggatctcggagagcctcactatcgaatgaag
gtgtcagggccagaattccaacagattttcacagccgaggtcatgcttggcgattccacc
gaagttcttgccagcgccacaggaagcagcaagcgcaaggctcagctggcggcggctgag
gtcgcgtggaagattttggacgcaaagaagagtcaacagccgtcccaagcatga
DBGET
integrated database retrieval system