Bifidobacterium aquikefiricola: QN215_02870
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Entry
QN215_02870 CDS
T10738
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
baqk Bifidobacterium aquikefiricola
Brite
KEGG Orthology (KO) [BR:
baqk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
baqk03016
]
QN215_02870 (truB)
Enzymes [BR:
baqk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QN215_02870 (truB)
Transfer RNA biogenesis [BR:
baqk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QN215_02870 (truB)
Prokaryotic type
QN215_02870 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
RRS1
TruB_C
DKCLD
Motif
Other DBs
NCBI-ProteinID:
XDS45085
UniProt:
A0AB39U7T2
LinkDB
All DBs
Position
655526..656788
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AA seq
420 aa
AA seq
DB search
MGESGILLVDKPQGVTSHDVVGAVRGALHTRHVGHAGTLDPMATGLLVVGFGKSTRLLRY
MVGHTKEYLATIRLGLATDSDDADGNLIRTDHAKQNHIESVLKSITQEGLQALVNEFFVG
AIDQIPSAFSSVRVHGKHSYELARNGEIPELKPRAITVFSFEILDVEHHEAQIPCNWRNE
ANEGSESTQNNEAEESAQSNATSSVTSAGGERTIAVPVVDVKVRVSCSSGTYIRALARDL
GARLGTGGHLIALRRTRVGDFCIDSHEASNTAKPCGSAEGESNERQECTTPAEDIAKVKV
EQRERRDRKTGAVEIRNRAVMTDSAETLLKYALSPAAAASRIMDSIEISAKEAVDLGYGR
DIDRRINTTSAAIYTAQDSKEAEALHTDEPQNTPRLCAILVPDSHGMAKPQTVFPVNVKA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgggagaatcgggcatcctgcttgtagacaaaccgcaaggcgtaacgagccatgatgtg
gttggggcggtaagaggggcattgcatacacgccatgttggtcatgcgggaactctcgac
ccgatggctacgggacttctggtggtcggattcggcaaatccaccagactgctgcgatac
atggtcggccatactaaggaatacctggcgacgatacggcttgggctcgcaaccgattca
gatgatgccgatggaaacttgattcgtacagatcatgccaagcagaatcacattgaatcg
gtgctgaaatccattacgcaagaagggttgcaggcactcgtcaacgagttctttgttggt
gcgattgaccagattcccagcgcattttcgtcagttcgcgtgcatggtaagcactcctat
gaacttgcacgcaacggtgagattccagagctcaagccaagggcaatcactgttttctcc
ttcgagattctcgatgtcgagcatcatgaagctcagattccatgcaactggcgcaatgag
gccaacgagggcagtgagagcacacagaacaacgaagccgaagagagcgcacagagcaat
gcgacgtccagtgttacgtctgctggtggagagcgaacgattgcagtgccggtcgttgat
gtgaaggtccgggtaagctgttcgagcggcacctatattcgtgcactggcacgagacttg
ggtgcacgattaggcacgggcggtcatctgatagcattgcggcggactcgggtcggcgac
ttttgcattgactcccatgaagcttccaacactgcaaagccttgcggaagtgctgaaggc
gaatccaacgaacgtcaagaatgcacgactcctgcggaagacatagccaaggtaaaagtc
gagcagcgtgagcgcagggacaggaaaaccggggcagtagagatccgtaacagagcggtg
atgactgacagtgcggaaaccctcctcaaatatgcgctaagtccagcggcagcagcttca
agaatcatggattccatcgagatttccgccaaggaagccgtggatctgggctatggtcgc
gatatcgacagacgtatcaatacgacatctgcggccatttacacggctcaagacagcaaa
gaagcggaagcgttgcataccgacgaaccgcagaacaccccgagattgtgtgccatccta
gtgcctgatagccatggtatggcgaagcctcaaaccgttttccctgttaacgtcaaagca
tag
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