Bifidobacterium aquikefiricola: QN215_05375
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Entry
QN215_05375 CDS
T10738
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
baqk Bifidobacterium aquikefiricola
Brite
KEGG Orthology (KO) [BR:
baqk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baqk03019
]
QN215_05375
Enzymes [BR:
baqk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
QN215_05375
Messenger RNA biogenesis [BR:
baqk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
QN215_05375
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
nSTAND3
PhoH
AAA_19
AAA_30
AAA_16
Motif
Other DBs
NCBI-ProteinID:
XDS43740
UniProt:
A0AB39U4Q5
LinkDB
All DBs
Position
1248912..1251485
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AA seq
857 aa
AA seq
DB search
MPDNPTRRYAAFRKRQAHTHTAAFRFASTLPFELDPFQEEAIEALEADDNVLVAAPTGSG
KTVVADFAVFLAQEHNVKAFYTTPIKALSNQKYHDLVEVFGEDHVGLLTGDTSINSEADI
VVMTTEVLRNMLYEHSTTLQALRYVILDEVHYLSDRFRGPVWEEVIIHLPASVRVIGLSA
TVSNVEDFSDWLQSVRGHTKLVITENRPVPLEQHVIVQSDDHTPPELIDLYRRNSNEGSH
QPKLNPQLIERLDQLDRQAARAHNNVQERKHGARHGRNGFRHNGQSNHFANARHVPRRWA
VVDELDYQDMLPGIYFIFSRNGCDQAVEQCMNAGLELTTADEAQRIRSIVDDMVDGQLSR
DDLKTLHFSSFRFALEEGFAAHHAGMVSLFRQIVERLFEAGLVKMVFATETLALGINMPA
RCVVVEKLEKFNGTGHVTLTPGEFTQLTGRAGRRGIDSIGHAVVVDHRDFVPATAAALAS
KRVYPLHSSFRPTFNMAVNLLNSSDYTTARITLDHSFAQWEANESAWQLESRMDTLTQAL
HGYEEAFACDYGDFAEFMEIRRRLSDAQKHDRQELKHTRFRSEQARSRAFRELDQRIAAL
KDQERHHPCRECPDVTTHLKWGHRWLREKKELERVRERYESRTGSVARQFDHICEILNAL
GFITPEYDTVESSLEHAKVNYALTPRGQMLRRIYSEQDLVLAQMIVDRDLQGLSAPELAA
VVSSLVYEARRGEGGGDGNFPGGPQGNMAIAVQATLGSRAHVSMLCEDYGLEPVKELDFG
MAQIVYAWANGESLSRVLRNSELTGGDFVRNTKRLADLLTQIAQVGNFFKDAASLSETAQ
QAVHAVNRGIVAYSGVD
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgccagataatccgactcggcgttacgctgcgttcaggaaaagacaggctcatacacac
actgctgcctttcgtttcgccagcacactaccatttgaacttgacccctttcaggaagag
gccatagaagccctggaagctgatgacaacgtgctcgtcgcagccccaacgggatctggc
aagacggtcgttgcagattttgctgtctttcttgcgcaggagcataatgtcaaggcgttc
tacacgacccccatcaaggcgttgagcaatcagaaatatcatgatctggttgaggtattt
ggagaggatcatgtgggtcttctgaccggagacacgtcaatcaactcagaggcagacatc
gtcgtaatgacgacggaagtgctgcgcaacatgctgtatgagcactcaaccacgcttcag
gctctacgatatgtcattcttgacgaggttcattatctcagcgaccggttcaggggaccg
gtctgggaggaagtgatcattcatcttcctgcatccgtccgcgtcattggactgtctgca
accgtgtcaaacgttgaggatttctccgactggctgcaatcggttcgtggccacaccaag
ctcgtcatcacggaaaaccgacccgtgcctttggaacagcatgtgatcgttcaatcggac
gaccatacccctcccgaactcattgatctgtatcgaaggaattcaaacgagggcagtcat
cagcccaagctcaaccctcaattgatcgaacgcctcgatcagctggatcggcaagctgca
cgcgcgcacaacaacgttcaggagcgtaagcacggtgccagacatgggcgcaatggcttc
cggcacaacggtcaatccaatcacttcgccaatgcccgtcatgtgcctcgtcgctgggct
gtagtcgatgaattggactaccaggacatgcttcctggcatatatttcatcttctcacgc
aacgggtgcgatcaggcggtcgagcagtgcatgaacgcaggtcttgaactcaccacagcc
gacgaggcgcagcgcattcgcagcatcgttgacgacatggtcgatggacagctcagcagg
gatgatttgaagaccttgcatttctcgtcgttcaggtttgcactcgaagaagggtttgcc
gcgcatcatgccggtatggtctcactgttcagacagattgtcgaacggctgttcgaggca
ggtctggtcaagatggtctttgccacggaaacactggctttgggtatcaatatgccggca
cgctgcgtggtggtggagaaacttgaaaagttcaacggcactggccatgtgacgttgact
cctggcgagttcacgcagctcaccggtcgcgctggtcgtcgtggcatcgacagcattgga
catgcagtcgttgtcgatcatcgagactttgttccggcaaccgctgcggcactggccagc
aaacgagtatatccgctgcattcaagcttcagaccaacgttcaacatggctgtgaatctg
ttgaattccagtgattatacgacggcacgaatcactctcgaccactcctttgcccagtgg
gaagccaatgaatcggcctggcagctagaatcacgcatggatacgctcacacaggcactg
catggatatgaagaggcgtttgcctgtgactacggtgattttgccgagttcatggagatt
cgcaggagactctcggatgctcagaagcatgaccgtcaggagctcaagcacacacgattt
agatctgaacaagcacgaagtcgggcattcagagagctcgatcagcgcattgcagcatta
aaggatcaggaacggcatcatccgtgcagagaatgcccagatgtgaccactcatttgaaa
tggggccatcgttggctgcgcgagaaaaaggagctcgaacgggttcgagaacggtatgaa
tcacggacaggttccgtagcccgtcaattcgatcacatctgcgagattctcaacgccttg
ggattcatcactcctgagtatgacactgttgagtcttcgctcgaacatgcgaaggtaaac
tacgccttgactccacgcggtcagatgctcagacgaatatatagcgaacaggatctggta
ctcgctcagatgattgtcgatcgggatctgcaaggtctttcagctccagagctcgcggct
gtcgtgtcatcgctggtctatgaagctcgacgtggcgaaggcgggggagacggcaacttc
cccggcgggcctcaaggcaacatggctatagccgttcaggcaacgctgggaagcagggct
cacgtttccatgctctgcgaagactatggtcttgaacccgtcaaggaactcgattttggc
atggcccagattgtctatgcatgggcaaacggcgagtctctgtcgcgtgtgctgcgcaat
tcagaactcacaggcggcgactttgtacgaaacaccaagcgactcgcggatttgctcacg
cagatagctcaggtcggcaacttcttcaaggatgccgcctcgctgtcagagactgctcag
caggctgtgcacgctgtgaaccgtggaatagtcgcatattcaggtgttgactga
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