Bifidobacterium aquikefiricola: QN215_05725
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Entry
QN215_05725 CDS
T10738
Name
(GenBank) DNA topoisomerase 4 subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
baqk Bifidobacterium aquikefiricola
Brite
KEGG Orthology (KO) [BR:
baqk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
baqk03032
]
QN215_05725
03400 DNA repair and recombination proteins [BR:
baqk03400
]
QN215_05725
Enzymes [BR:
baqk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
QN215_05725
DNA replication proteins [BR:
baqk03032
]
Prokaryotic type
DNA Topoisomerases
QN215_05725
DNA repair and recombination proteins [BR:
baqk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QN215_05725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
XDS43800
UniProt:
A0AB39U4X6
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All DBs
Position
1332781..1335426
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AA seq
881 aa
AA seq
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MASRRKPPFDPRSIKEHIVETPLGDEMSKSFLEYAYSVIYARALPDARDGLKPVQRRIVY
QMGQMNLTPDKAYMKSARVVGEVMGKLHPHGDSAIYEAMVRLAQPFAMRLPLVDGHGNFG
SLDDGPAASRYTEARLGSAALGMNENIDEETVDFSPNYDNKLQEPIVLPAAFPNLLVNGA
SGIAVGMATNMATHNLGEVVAAAQYLMGNPDASLTDLMRFVPGPDWPTGGIIVGRDGIRE
AYEHGKGAVITRSATHIENVTARKKAIVVTELPFMVGPERVLERISEGVKNRKLEGISGA
IDLTDRHNGTRLVIEIKTGFDPDAVLAQLFKHTPLQESFTINNVALVNGRPHTMGLKELL
SVWIDHRRLVVKRRSEYRKRKALERLHLVEGMLLALIDIDEVIQVIRSSDDADAAKTRLM
AVFDLDDIQAQYILDLRLRRLTRISRIELEAEQDELHKRIEELNTILSSKTELDRVVNDE
MGVAAQTWGNPRRTVLLDADPSGSLLPVAISDESGAPSQSASALAAAHSASKLSGHSGSG
RSNAAASAAGKGSGLRIEDEPCTVMLSASGLIARSSSTALDGWKSRSASDGRAENDQIVS
IFSTTTRSKYALVTSAGRYVLANVSDLPALPSTAALSVSGGVHADELLGMTQSTEQSPHE
HVVAAVVADSTTPLAIGTRHGIVKRWNGEAPSTMDSWNVIDLKQDDQVVFAAPADDEALV
VFVSSDSSLLAFHAKDVRPQGRNAAGMAGIRLSEGQHVCAFNAIAAGQISWTYLENDDSG
MTSQAGAVVFTVAGDSQALAGTENGCGKITPLEMYPTKGRGSRGVRSQRFLKGQDTLILA
CIGTWPLRASTASGTPVDLPEVDMRRDVSGQDLSAPIAYVA
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgcgcagaaagccgccgtttgatccgagaagcatcaaggagcacattgtcgaa
acgcctctgggcgatgagatgagcaagtcgttcctcgaatatgcctattcggtcatctat
gcgagagctttgcctgatgcccgcgatggtctgaaaccggtgcagcgcagaattgtctat
cagatgggacagatgaatctgacacctgacaaggcgtatatgaagtcagcgcgtgtggtg
ggagaagtcatgggcaagctgcatccccacggcgattctgcaatctatgaggctatggtg
cgtctagcgcagccatttgcgatgagactccccctggtcgatggtcatggcaatttcggt
tcacttgacgatggtcccgccgcctcgcgatacacggaagctcgtctgggatctgccgcc
ttgggaatgaatgaaaacatcgatgaagagaccgtcgatttttcacccaactatgacaat
aagctgcaggagccaatcgtccttcccgcagcgttcccgaatctgctggtcaatggcgca
tcgggcatcgcggtgggtatggcgacgaatatggcgacgcacaatctgggagaggtcgtt
gcggccgcacaatatctgatgggcaatcctgatgccagtctgaccgatcttatgcgcttc
gtgcctggacctgactggccgactggtggcatcatcgtcggccgagacggcatccgcgaa
gcctatgagcatggcaaaggtgccgtgatcacacgttctgcaacacatattgagaatgtg
accgcgcgcaaaaaagccatcgtggtcaccgagctgccgttcatggtaggtccggaacga
gtgctcgaacgcatatccgaaggcgtcaagaaccgcaagctcgaaggtatctcaggtgcc
atcgatctgacagaccgtcataatggcacacgactcgtcatcgagatcaagacaggtttc
gaccctgatgccgtgcttgcacagctgttcaagcatacgccgttgcaggaatccttcacc
atcaacaatgtggctctggtcaacggcaggccgcataccatgggactgaaggagctgctg
agcgtctggatcgatcaccgtcgactcgtggtcaagcgccgcagtgaataccgcaagcgc
aaggcattggaacgcctgcacctggttgagggaatgctgcttgccctcattgacattgat
gaagtcatccaagtgattcgcagctccgacgatgccgatgccgcaaaaacccgtttgatg
gctgttttcgatcttgatgacatccaagcacagtacattcttgaccttcgtcttcgtagg
ctcacccgcatcagcaggatcgaattggaggcggaacaggacgaattgcataagcgcatc
gaagagctcaataccatcctctcttccaagactgaactggaccgtgtcgtcaacgatgaa
atgggcgttgcggctcagacatggggaaatccacgccgtaccgtgctgcttgatgccgat
ccttccgggtcactcttgcccgtagccatatccgatgaatctggcgcaccctcgcaatcc
gcttcagcgcttgcagcggctcattcggcaagcaagctgtcaggccactcagggagtgga
cgatccaacgctgcagcgtcagcagcaggcaagggttctggacttcgcattgaggatgaa
ccatgcaccgtgatgctcagcgcatccggcctgatagctcgaagctcctcgactgctctg
gatggatggaaatctcgttccgcatccgatggccgtgccgagaacgaccagatcgtgtcc
atcttctctacgacaacacgatccaaatacgcgctggtgacctcagcagggcgatacgtg
cttgcaaacgtcagcgatctaccagcattgccctccaccgctgccttgagcgtgagcgga
ggggtgcatgcggatgaactgcttggcatgacgcaatcgaccgaacagtcaccgcatgag
cacgttgtggcggccgtggttgccgatagcaccacgcctctagcgatcggcactcgccat
ggcatcgtcaaacggtggaatggtgaagcgccgagcacgatggattcttggaatgtcatc
gatctaaagcaggatgatcaggtggtattcgcagctcctgccgatgacgaggccttggtc
gttttcgtgtcttccgattcgagcctgcttgccttccatgccaaggacgttcgcccgcag
ggtcgaaatgcggcgggaatggcgggcattcgtctgagtgagggtcagcatgtgtgcgct
ttcaatgccattgctgccggccagatctcgtggacctatctggagaatgacgacagcggc
atgacatctcaggccggagcggtcgtgttcacggttgcaggcgattcccaggcactggca
ggcacggagaacggctgtggcaaaataaccccgcttgagatgtaccccaccaagggacgc
ggaagccgtggcgtgcgctctcagcgcttcttgaaaggtcaggacacccttatcttggct
tgcatcggtacgtggccgctgcgggcttccacagcttcgggtacccctgttgacctgccg
gaagtcgacatgcgcagggatgtatccgggcaggatctgagcgctcccatcgcctacgtt
gcctga
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