KEGG   Bifidobacterium aquikefiricola: QN215_06740
Entry
QN215_06740       CDS       T10738                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
baqk  Bifidobacterium aquikefiricola
Brite
KEGG Orthology (KO) [BR:baqk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:baqk03032]
    QN215_06740
   03036 Chromosome and associated proteins [BR:baqk03036]
    QN215_06740
   03400 DNA repair and recombination proteins [BR:baqk03400]
    QN215_06740
DNA replication proteins [BR:baqk03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    QN215_06740
Chromosome and associated proteins [BR:baqk03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    QN215_06740
DNA repair and recombination proteins [BR:baqk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      QN215_06740
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: XDS43969
UniProt: A0AB39U4L3
LinkDB
Position
1580790..1581071
AA seq 93 aa
MAYNKSDLVSKIAQKSNLTKAQSEAAINAFQDIFVESLQSGEGLRLTGLFSAERVKRAAR
TGRNPRTGETIKIPASYGVRISAGSLLKKAVTK
NT seq 282 nt   +upstreamnt  +downstreamnt
atggcatacaacaagtctgatctcgtctcaaagattgcacagaagtcgaacctgaccaag
gctcagtccgaggcagcaatcaacgcatttcaggatatttttgtagagtccctccagtca
ggcgaaggcctgagacttacgggtcttttctcggcagagcgcgtcaagcgtgctgctcgc
accggccgcaacccacgaaccggcgaaaccatcaagattccagcaagctacggcgttcgt
atcagcgctggctcactgctgaagaaggcagtaaccaagtaa

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