KEGG   Bifidobacterium aquikefiricola: QN215_06790
Entry
QN215_06790       CDS       T10738                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
baqk  Bifidobacterium aquikefiricola
Pathway
baqk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:baqk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    QN215_06790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:baqk03400]
    QN215_06790
Enzymes [BR:baqk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     QN215_06790
DNA repair and recombination proteins [BR:baqk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     QN215_06790
SSDB
Motif
Pfam: PriA_3primeBD
Other DBs
NCBI-ProteinID: XDS43978
UniProt: A0AB39U538
LinkDB
Position
complement(1591099..1593399)
AA seq 766 aa
MVGSNAEQLALDGLAPRKRRKRAPAERVPAERNPIAQVILDVQATQLGSTFDYLVQSKDD
EAAQPGVRVRVRFGHQLLFGFIWKRVASSSAPPSALRYIERVVSPQVAVSEQNRADITDI
ANAYGGTRANILRMAVPPRVARVDVEQQLVTGRFAIGVSEALKQHLQTWCDERYATLERS
YDHMGQLRASIASHASSGYVWNVLPGVLRWAYDAAWALIEALLVGKAGIMVLPDMRHVLD
LVEVLQNAGLRRFAPSKAAHGSWDGDFAVLGAALPPEERYRAFQAVASGQIRCVIGTRAV
MYAPVEGSAVFAIMDDNAYQNADGFMPYAHARGVLRLRARNHRGTFIDFSAVRSPISQWE
IQDESHAANSVCGTSINVRGLRTVTQEQSPWIRWLNREELARLADPAIGARVPHTAVAVI
LRALKLGPVLLSIPRESSHEVLCCSACHRQARCNRCTGPLMGTIHDGRVPHCLWCGAAAV
DWSCANCGNESMRVLRVGAQGTAAELKGLFRHVPIVVSTPQQPRGVVTDIVDKPQIVIAT
PGAEPRVRPVGNSGGNSNGSSVGNSAEASRMREQSSYQAVAILDAWASLYAFGVDARIDT
LTDWMHASSLCLPRTQGGQVMLIGETDPALAQSLMLWDSGVLAKQELKDRAATALPPVVA
AACIWGNRDAVMNTMNEIGVLRGDYAAVEINGEEVPGFLGPVPIAPPRNIAARQLEGTHD
RVRAIVRVRVQARDELALRLRASVAKHMATRNPKELHFKMDPKDLM
NT seq 2301 nt   +upstreamnt  +downstreamnt
atggtcggttccaacgcagagcagttggcacttgatggccttgctcctcgcaaacgccgc
aaaagagcccctgcagagcgtgtacctgccgaacgcaatccgatagctcaggtcatcttg
gacgtgcaggcaacccagcttggttcaaccttcgattatctggtgcaatccaaggatgac
gaggctgcacagccgggagtgcgcgtgcgcgtgcgctttggccatcagctgctctttgga
ttcatctggaagcgcgtcgcatccagttctgcgccgccatcagcgctgcgctacatagag
cgagtggtcagtccacaggtcgcagtcagtgagcagaacagggcagacatcaccgatatc
gcgaacgcatacggcggcaccagagccaatattctcagaatggcagtgccccccagggtg
gcgcgcgtcgacgtggaacagcagctggtcaccggacgcttcgccataggggtgagcgaa
gcgttgaagcagcacttgcagacgtggtgtgacgaacgatatgccacgctggaacgcagc
tacgaccatatggggcagcttcgcgcgagcattgcgtctcatgcgtcgtcaggatatgtg
tggaacgtgttgcccggagtgctacgatgggcgtacgatgccgcatgggcgttgatcgag
gctttgcttgtcggcaaggctggaatcatggtactgcctgatatgcggcatgttctcgat
ctggttgaggtgctgcagaacgcgggactacgacgctttgccccaagcaaggcagctcat
ggttcgtgggatggagactttgctgtgctcggcgcagccctgccgcccgaggaacgatat
cgggctttccaggccgttgcgagcggacagattcgatgcgtcatcggcacgcgcgccgtg
atgtatgcgccagtcgagggcagcgcagtcttcgccatcatggacgataacgcctaccag
aatgcggacggcttcatgccctacgcccatgcgagaggggtgctgcgactgcgtgcgaga
aaccatagaggtaccttcatcgacttttccgcagtgcgcagccccatcagccaatgggaa
atccaggatgaaagccatgcagccaactcggtgtgcggcaccagcatcaacgttcgagga
ttgcgtaccgtgacgcaggagcagtcgccatggattcgatggctgaatcgcgaggaactc
gcccggctcgcggatccggcaatcggcgctcgtgtcccgcatacggccgtcgcggtcata
cttcgtgcgctgaagcttggcccggtgctgctttccatccctcgtgaaagctcccacgag
gtactgtgctgcagtgcgtgccatcgtcaggcgcgttgcaatcgttgcacgggtccattg
atgggcaccattcacgatggacgcgtcccacactgcctatggtgtggtgccgctgccgtc
gactggtcatgtgcgaattgcggcaacgaatccatgcgcgttctgcgcgtcggcgcacag
ggcacggctgcggaactgaaaggtctgttccgccatgttccgattgtggtgtcaacacca
cagcagcccagaggagtggttaccgacatcgttgacaagccgcagatcgtgatagccaca
ccgggggctgagcctcgtgtgagaccggttggaaactcaggtggaaactcgaatggaagc
tcggttgggaactcggctgaggcatccagaatgcgcgaacagtcgtcgtatcaggctgtg
gccattcttgatgcatgggcgagcctctatgccttcggggttgatgccagaatcgatact
ctgacggactggatgcacgcttcctcgctgtgccttcctcgaacgcagggcggtcaggtc
atgctcatcggagaaaccgatccggcactggctcagtcgctgatgctgtgggacagtggc
gtgctggcaaagcaggagttgaaggaccgcgcagcaaccgcgctgccgcctgtcgtcgcc
gctgcatgcatatggggtaaccgcgatgccgtcatgaacacgatgaatgagatcggggtt
ctcaggggagactatgctgccgtggaaatcaatggcgaggaggttcccggatttcttgga
cccgtgccgattgcaccaccgcgcaacattgcggcacgtcagctcgaaggcacgcatgac
cgcgtgcgggcgattgtgcgtgtgcgcgtgcaggcaagggatgaactggcattgcgattg
cgtgcgagcgtggccaagcatatggcgacgcgaaatcccaaggaattgcattttaaaatg
gatccgaaggatctgatgtag

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