KEGG   Bifidobacterium aquikefiricola: QN215_07025
Entry
QN215_07025       CDS       T10738                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
baqk  Bifidobacterium aquikefiricola
Pathway
baqk03420  Nucleotide excision repair
baqk03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:baqk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    QN215_07025
   03430 Mismatch repair
    QN215_07025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:baqk03400]
    QN215_07025
Enzymes [BR:baqk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     QN215_07025
DNA repair and recombination proteins [BR:baqk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     QN215_07025
   MMR (mismatch excision repair)
    Other MMR factors
     QN215_07025
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_12 Viral_helicase1
Other DBs
NCBI-ProteinID: XDS45577
UniProt: A0AB39U9A3
LinkDB
Position
complement(1648114..1649661)
AA seq 515 aa
MLHAENPHDSEILKSLDDDQFAAASTVEGPVRIIAGAGAGKTRTITHRIAYACSIGAWNP
SETLAVTFSVKAAEEMKTRLMSLGASEAIQTATFHAAALAQIRNVWYELSDAPFPQIIQD
PRALLAVALKRVSGTDDIDAMQMRDLLAEIAWMKVSLIAPQDYERVCSALHRVPPADLDP
QAMAAVMSAFEQEKSSRNQIDFNDMLLIDCNIIERHPEAAESIRKRTKHVTVDEYQDVSP
LQHRLLQLWMGKGKSVCVVGDAAQTIYSFAGASSYYLRHFAEEFGPLAADVELNTDYRST
PQIVNYANMVLSKSPESATYLSLKSPRKQGKRVNTVVFPDDSSEVGAIAQRISRMMKADK
DIGSIAILTRVNAQQRAVCAALGERNIRYQVRTDSGWQSSTVDSGKAQDLSRALKGASAD
GEEAQAARNALRTVTVSTIHAAKGLEFSHVFIIGCSEGLIPFGSGQDGNLEEERRLMYVG
ITRAEDVLTLSFARSARGNGYTERKPSRFLLRSRA
NT seq 1548 nt   +upstreamnt  +downstreamnt
attttgcacgcagaaaacccccatgatagcgagatcctgaagtcgcttgacgacgaccag
tttgcagccgcatcgacggtcgagggtccagtgcgcatcatcgccggtgcaggtgccgga
aaaacccgcaccataacccaccgcatcgcctatgcgtgctcgataggggcctggaatccc
agtgaaacattggccgtaaccttctccgtcaaggcagccgaagagatgaaaactcggctg
atgagtctgggagcaagcgaggcaatacagacagcaaccttccacgctgcggcattggct
cagatcagaaacgtctggtatgagctcagcgatgcgccattcccgcagattattcaagat
cccagagccttgcttgccgtcgcgctgaaacgtgtgtcgggcactgacgacatcgatgcc
atgcagatgcgagaccttcttgctgagatcgcttggatgaaggtctcgctgatcgctcct
caggattatgagcgcgtatgctctgccttgcatcgggtaccgcctgcagatcttgacccg
caggcgatggcagcggtgatgtcggccttcgaacaggagaagtccagtcgcaatcagatc
gatttcaacgatatgctgctgatcgactgcaacatcattgaacgtcatcccgaagcggcc
gagagcattcgaaaacgcaccaaacatgtgaccgttgacgaatatcaggatgtctccccg
ctccagcacagactcttgcagctatggatgggcaaaggcaagtcagtctgtgtcgttggt
gacgcggcgcagacgatatactcattcgccggggcaagcagctactatctgcgtcacttc
gctgaggagtttggaccacttgcagccgatgtcgaactcaatacggattatcgctcaacg
ccacagatcgtgaactatgcgaacatggtgctttcgaagagtccagaaagcgcgacatat
ctctcactaaaatcaccgcgcaagcaaggcaaacgcgtcaacacagtggtattccccgat
gattcgagtgaagtcggagccatcgcacagcgcatttcacgcatgatgaaagccgacaaa
gacattggatccattgccattctgactcgtgtgaacgcccagcagcgagcggtgtgcgcc
gcgttgggcgagaggaacatccgatatcaggttcgcaccgattcaggatggcagagctcg
accgtcgactctggcaaggctcaggacttgagtcgcgctttgaaaggcgcatccgctgac
ggggaagaggctcaggcggcgagaaatgcgctacgaaccgttacggtttcgaccattcat
gcagccaagggcctagagttctcccacgtgttcatcattggatgctcagaaggactcatt
ccgttcggatcggggcaggatggcaatctcgaagaagagagacggctcatgtacgtcggc
atcacaagagccgaggatgtgctcacgctttctttcgccagaagcgctcgcggcaacgga
tacaccgaacgcaagccaagtcggtttctgcttcgcagccgggcataa

DBGET integrated database retrieval system