Bifidobacterium aquikefiricola: QN215_08680
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Entry
QN215_08680 CDS
T10738
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
baqk Bifidobacterium aquikefiricola
Pathway
baqk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baqk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QN215_08680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baqk03019
]
QN215_08680
03016 Transfer RNA biogenesis [BR:
baqk03016
]
QN215_08680
Enzymes [BR:
baqk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QN215_08680
Messenger RNA biogenesis [BR:
baqk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QN215_08680
Transfer RNA biogenesis [BR:
baqk03016
]
Prokaryotic type
tRNA degradation factors
QN215_08680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
Ribonucleas_3_2
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
XDS44326
UniProt:
A0AB39U5Y7
LinkDB
All DBs
Position
complement(2059552..2062230)
Genome browser
AA seq
892 aa
AA seq
DB search
MEGPEIQAAEAVIDNGSFGTRTLRFETGRLAQQADGAVAAYLDDDSMVLSTTTAGSSPKE
NYDFFPLTVDVEEKMYAAGKIPGSFFRREGRPSSEAILACRIIDRPLRPLFPHTLRNEVQ
VVETVLSVNPEDAYDMIALNGASASTMISGLPFEGPVSGVRLALIDGQWVAFPRWSERER
AVFEIVVAGRVIENGDVAIAMIEAGAGKNAWKLIYDEDQIKPDEDVVAQGLEAAKPFIKA
ICEAQDELKSKVAKETKEFPLFPEYTDDLYKRIDEIAHGDLDEALSIADKLPRQDRIHEI
KEKVREALASEFTDMGDAEKDKELGNAFKELQRQIVRQRILTQDYRIDGRGLRDIRTLSA
EVDIVPRVHGSALFQRGETQILGVSTLNMLKMEQQVDALSGPTSKRYMHNYEMPPYSTGE
TGRVGSPKRREIGHGALAERALVPVLPSREEFPYAIRQVSEAIGSNGSTSMGSVCASTLS
LLAAGVPLKAPVAGIAMGLVSGDVDGKHIFKTLTDILGAEDAFGDMDFKVAGTSEFITAL
QLDTKLDGIPADILAAALQQAKEARTTILEVINECIDSPAEMSPYAPRIISTTVPVEKIG
EVIGPKGKMINQIQEDTGADVTIEDDGTVYISSEGGEAAAKAKEMIDQIANPHVPEAGET
FNGKVVKTTSFGAFVNLTPGTDGLLHISQIRNLTNGERVDAVEDVLKEGDTVEVIVQGVD
DRGKISLAIPGFESQESASQSRGDRGDRGDRGDRGDRHGDRRGDRGDRGGYRSHYNNDDR
PRRRRDDRDDRGEHADRSDRSDRGYDRRDRHDDRSDRYERHDRDSRSDRGERSDNRHDRN
DRRDDRRGGYRGRREAPHYAPDEHYDEYRADREERSERPRRRVRKDFDPFED
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
gtggagggtcccgaaatacaagccgcagaagcggttattgacaatggctcattcggaacg
cgcacattgcgtttcgaaaccggtcgtcttgcccagcaggcagacggtgcggtcgcagcc
tatcttgatgatgattcaatggtgctttcaaccacaacagctggttcaagccccaaggaa
aattacgatttcttcccactcaccgttgatgtggaagaaaagatgtacgcagccggcaag
attcccggctcgttcttccgtcgtgaaggtcgcccgtcctcggaagccattctggcctgc
cgaatcatcgaccgtcctttgcgcccattgttcccgcacaccttgcgcaacgaagtccag
gttgtagagaccgttctctccgtcaacccagaagacgcatacgacatgatcgcactcaac
ggtgcgtctgcttccacgatgatttccggactgcctttcgaaggtccagtttccggcgtt
cgtctggccttgattgatggtcagtgggttgcattcccacgttggagcgagcgtgagcgc
gcagtattcgagattgtcgttgctggccgagtcatcgagaatggtgatgttgccatcgcc
atgattgaggctggtgcaggcaagaatgcctggaagctcatttacgacgaggatcagatc
aagcctgatgaagatgttgtggcacagggtcttgaggctgccaagccgttcatcaaggca
atctgcgaggcgcaggacgagctcaagtccaaggttgccaaggaaaccaaggaattccca
ctcttccctgaatacaccgatgatctatacaagcgcatcgatgagattgcccacggcgat
ttggatgaggctctttccatcgctgacaagctgccgcgtcaggacagaattcacgaaatc
aaggagaaggttcgtgaagctctcgcctctgaattcaccgacatgggagatgccgagaaa
gacaaggagctgggcaacgccttcaaggagttgcagcgccagatcgttcgtcagcgcatt
ctgactcaggactaccgcattgatggccgcggtcttcgcgacatcagaaccctgtccgcc
gaggttgacatcgttcctcgcgttcacggttcggcgctcttccagcgtggtgagacccag
attcttggtgtcagcacactgaacatgctcaagatggagcagcaggtcgatgccctttcc
ggcccgacttcaaagcgttacatgcacaattacgaaatgcctccatactcaactggtgag
acgggccgcgtcggttcgccaaagcgtcgtgagatcggccacggtgctcttgcagagcgc
gcgctggttccagtgcttccaagccgcgaagagttcccatacgccattcgccaagtctcc
gaagccattggttccaacggttcgacttccatgggttcggtgtgcgcttcgactttgtcg
ctgctcgcagcaggcgttcctctgaaggctccagttgccggcatcgccatgggactcgtg
tccggcgacgtcgatggcaagcacatcttcaagacactgaccgatattctcggtgcagag
gatgctttcggcgacatggacttcaaggttgcaggtacctcggaattcatcaccgcgctg
cagcttgacaccaagcttgacggcattcctgccgatattcttgctgctgccttgcagcag
gccaaggaagctcgcacgacgattctcgaagtcatcaacgagtgcatcgacagcccagcc
gagatgagtccatacgcaccgcgcatcatcagcaccaccgtccccgtcgagaagattggc
gaagtcattggcccgaagggcaagatgatcaaccagattcaagaggacaccggcgctgac
gtcaccatcgaggatgacggtacggtttacatttcttccgaaggtggcgaagctgcagcc
aaggcgaaggaaatgattgaccagatcgccaacccacatgttccagaagccggagagacc
ttcaatggcaaggttgtgaagaccacaagctttggagccttcgtcaatctcacgccagga
accgatggtctgcttcacatttcacagatccgtaatctcaccaacggtgagcgcgtggac
gctgtcgaagatgtgctgaaggaaggcgacaccgtcgaggtcatcgtgcaaggcgttgac
gaccgcggcaagatttcgcttgccattccgggatttgaaagccaggagagcgccagccaa
tcacgtggcgatcgtggagatcgtggagaccgcggagaccgcggagaccgtcatggtgat
cgccgtggtgaccgtggtgatcgcggtggatatcgctcgcattacaacaatgatgatcgc
ccacgtcgtcgccgtgacgaccgtgatgatcggggcgagcatgctgatcgttctgaccgt
tccgaccgtggctacgaccgcagggatcgtcatgatgatcgttcggatcgttacgagcgt
catgatcgcgatagtcgttctgatcgtggcgaacgcagtgataaccgtcatgaccgcaat
gaccgtcgtgatgatcgtagaggcggctaccgtggtcgtcgcgaagctcctcactatgct
ccagacgagcactatgacgagtatcgcgcagaccgcgaagaacgcagcgaacgccctcgc
cgcagagttcgcaaggactttgatcccttcgaggactaa
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