Bacillus aquiflavi: K6959_06275
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Entry
K6959_06275 CDS
T08352
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
baqu
Bacillus aquiflavi
Pathway
baqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6959_06275 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baqu03019
]
K6959_06275 (rny)
Messenger RNA biogenesis [BR:
baqu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K6959_06275 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
Propep_M14
KH_2
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
UAC49444
LinkDB
All DBs
Position
1252925..1254487
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AA seq
520 aa
AA seq
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MDPKTAIISILLGLIVGAVVGYFIRKSIAEAKISGAKNAAEHILEDAKREAESLKKEALL
EAKDEIHRLRTEAEREVRERRTELQKQENRLLQKEENLDRKDETLDKREAVLEMKEDSLN
QRQQHIEEMESKVDEMVRAQQAELERISSLTRDEAKSIILDRMEQELAHDIAMMIKESEN
RAKESADKKAKEILSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRRETARLALDKLVQDGRIHPARIEEMVEKARREVDEHIR
EIGEQTTFEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSIEVAQLSGLLAAELGEDEML
ARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSIIAVLV
AAADALSAARPGARSETLENYIRRLEKLEEISESYDGVEKSFAIQAGREVRIMVKPDQIN
DLEAHRLARDIRKRIEDELDYPGHIKVTVIRETRAVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaaaacagcgatcatctccattttgcttggcctaatcgtcggtgcagttgtt
ggctattttattcgaaaatccattgctgaggcaaaaatatcaggggctaaaaatgcagct
gagcatattttagaagatgcaaagcgagaggcagaatctttgaaaaaagaagctctatta
gaggcaaaggatgaaattcacagacttcgaacagaagctgaacgtgaagttcgtgaacga
agaacagaacttcaaaaacaagaaaaccgtttattacaaaaagaagagaaccttgatcga
aaagatgaaacgttagataaacgtgaagcagtattagaaatgaaggaggattctcttaac
caaagacaacagcatattgaagagatggaaagcaaagtggacgagatggtacgtgcacag
caagcagaactcgaacggatctcaagtttaacgcgcgatgaagcgaagtcaattatttta
gatcgtatggaacaagaactagctcatgacatcgcgatgatgattaaagagagtgaaaat
cgtgctaaagaaagtgcggataaaaaagcgaaggaaattctttcacttgccattcagcgt
tgtgccgctgatcatgtagctgaaacgactgtatcagtagttaatcttcctaatgatgaa
atgaagggacgaataatcggtcgtgaaggcagaaatatccgtacacttgagacgttgaca
gggattgacctcataattgatgatacaccggaggcggtcattttatctggttttgatccg
attcgccgagaaacggcacgactcgctcttgataagcttgttcaagacggacgtattcac
ccggctcgcattgaagaaatggttgaaaaagcgcgacgtgaagtagatgagcatatccgc
gaaattggtgaacaaacaacttttgaggttggagttcacgggctccatccagatcttatt
aaaatacttggacgtttaaaattccgtacaagctatgggcaaaatgtgttaaaacactca
atagaagttgctcagctttctggtttattagcggccgaactcggtgaagatgaaatgtta
gctcgtcgagcaggcttgcttcatgatatcggtaaagcgattgatcatgaagtagaagga
agtcatgtagaaatcggagtggaacttgcgacgaaatataaggaacacccggtagtaatt
aatagcattgcttcccatcatggtgatacagagccgacttcaattatcgccgtacttgtt
gcagcagcggatgcattatcagccgcaagacctggtgcacgtagtgaaacgcttgaaaac
tatattcgccgtcttgaaaagcttgaagaaatttccgaatcgtatgatggtgtggagaag
tcatttgcaattcaagcaggacgtgaagttcgaattatggttaagcccgatcaaatcaat
gatcttgaagctcatcgattggcacgggatattcgtaagcgaattgaagacgagcttgat
tacccaggacatattaaagttacggttattcgtgaaacgagagctgttgaatatgcaaaa
taa
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