Bacillus aquiflavi: K6959_11800
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Entry
K6959_11800 CDS
T08352
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
baqu
Bacillus aquiflavi
Pathway
baqu03410
Base excision repair
baqu03430
Mismatch repair
baqu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
baqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K6959_11800 (recJ)
03430 Mismatch repair
K6959_11800 (recJ)
03440 Homologous recombination
K6959_11800 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
baqu03400
]
K6959_11800 (recJ)
DNA repair and recombination proteins [BR:
baqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
K6959_11800 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K6959_11800 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
K6959_11800 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UAC47386
LinkDB
All DBs
Position
complement(2427986..2430352)
Genome browser
AA seq
788 aa
AA seq
DB search
MLRSKTRWSVRQADQNKVQELVNELNITPLVASLLVNRGIDTVESARFFLCEENQTFHDP
FLFKDMSIAVERIKLAIQLQESILIYGDYDADGVCSTSIMMLTLQELGANVRYYIPNRFT
EGYGPNEAAFKKAAKAGVTLIITVDTGIAALNEANIAKELGIDLIITDHHEPGPALPNAY
AIIHPKLKDSYYPFTELAGVGVAMKLAHALYGQVPTHLLDIAAIGTVADLVSLQGENRLI
TKLGIEKLRTTNRIGLKALFKKAQIEQITINEETIGFALAPRINAVGRLDQADPAVNLLL
TEDPLEGEQLANKIEQWNIDRQTLVNKITEEAVQIVEEHHHLDENPVLVIEKEGWNSGVI
GIVASRLTERFYRPTIVLSIDSETGLAKGSARSIAGFDLFKNLSSCKDILPHFGGHQMAA
GMTLKSEDISELKNRLHHLAKKQLTAKDFTPITELDAKVFIEDINIDTILQVFKLAPFGM
DNPKPKILIEDVSIASIRKIGADKNHLKVHFEENGITLDAVGFRMGHLYEHISPSSKLSA
IGEVSINEWNNIRKPQLFLHDLAVTTWQLFDLRGIKRFEKLVEVIPNENRKWIVFQQNTM
DKLKLNSNEEICLIRSTAEAAALQLKGINAVLVDLPIEKELLHHLIMGKTLERIYVHFYK
ASSDFFSTIPTREHFKWYYAFLAKKGPFDLNKFGDELAKYRGWSHETVDFMSQVFFDLNF
AKINNGFISLTNTVKKRDLTESPTYKRKQAQIALEKDLLYSSYNQLKNWFDVHSQEPVKN
EEAAKEWI
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
gtgttaagatcaaaaactagatggagtgttcgacaagctgatcaaaataaagtacaagaa
cttgttaacgaattaaacataacacctcttgttgcttcattactcgtcaatcgaggaata
gataccgttgagtctgcacggttttttttatgtgaagaaaatcaaacatttcatgatcct
tttctatttaaagatatgagcatcgcagttgaacggataaaattagcaattcaattgcag
gaatctattttaatttatggtgattatgatgctgatggggtttgcagcacatctattatg
atgctcactcttcaggaattaggggcaaatgtacggtactacataccaaatcgatttact
gaaggctatggcccaaatgaagctgcttttaagaaagctgcaaaagcaggggtaacttta
atcattacagttgacacgggaatcgcagctcttaatgaggcaaacattgctaaagagcta
ggaattgatttaattattactgatcaccatgagcctgggcctgctctaccaaatgcatat
gcgattatccatccaaaactaaaagatagctattatccttttacagagttggccggagtt
ggtgtagcaatgaagttagctcatgcactatatggtcaagttccgacccaccttcttgat
attgccgcgatcggcacagtcgctgatcttgtgtcattgcaaggggagaatcgcttaata
actaaattaggaattgaaaaattaagaacgactaacaggataggtcttaaagcactattt
aaaaaagcacaaatcgagcaaataactattaatgaggagacaatcggttttgcattagcc
ccaagaatcaatgcagtcggcaggttagaccaagctgatccagcagtaaatttactatta
acggaagatcctctcgaaggagaacagctagcaaataaaattgaacaatggaatatagac
agacaaacactcgtaaataaaataacagaagaagcagtacaaattgttgaggagcatcat
catttagacgaaaatcccgtcctcgtcattgaaaaagaaggatggaactctggtgtaatt
ggtatagtagcttctaggctaaccgagcgcttctatcgcccgacaattgtgttaagtatt
gattccgaaactggattggctaaaggttctgctcgaagtattgctggctttgatttattt
aaaaatttatcatcatgtaaagatattcttcctcactttggaggccatcaaatggcagca
gggatgacattaaaaagtgaggatatttctgagcttaaaaaccgcttacatcatcttgct
aaaaaacagttaactgctaaagattttacaccgattactgagcttgatgcaaaagttttt
atagaagatattaacatagacacgattttgcaagtttttaagctagctccatttggtatg
gacaacccaaagccgaaaatattaatagaggatgttagtattgcgtcaattagaaaaata
ggtgctgataaaaatcacttaaaagttcattttgaggaaaacggtattactttagatgca
gttggttttagaatgggtcatttatatgaacatatttcaccgtcttcaaaactatcggct
attggagaagtttcgattaatgaatggaataatattcgtaaaccgcaactttttttacat
gatttggccgttacgacatggcaattatttgatttacgcggtataaaaagatttgaaaag
ctcgttgaagtgatcccaaatgaaaatcgaaaatggatcgtttttcaacaaaacacaatg
gacaagcttaaattaaattctaacgaggaaatttgtttgatccgatcaactgctgaagcg
gctgcattacagcttaaagggataaatgctgtattagtcgacttgccgatagaaaaagag
ttattgcatcatttaataatgggaaaaacactagagagaatttatgttcacttttataaa
gcaagcagtgacttttttagtacaataccgacaagggaacattttaaatggtattatgct
tttttggcgaaaaaaggaccgtttgatttaaataaatttggtgatgaacttgcaaaatat
cggggctggtcacatgaaacagttgattttatgtcacaggtgttttttgatttaaatttt
gctaaaataaacaatggatttatttctttaacaaatacggttaaaaaacgagatttaaca
gaatctccaacatataaaagaaagcaagcacaaattgctcttgaaaaagatttactatat
tcttcgtacaaccaacttaaaaactggtttgacgtacattcacaagagcctgtgaaaaat
gaggaggcagcaaaagaatggatttaa
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