Bacillus aquiflavi: K6959_14480
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Entry
K6959_14480 CDS
T08352
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
baqu
Bacillus aquiflavi
Pathway
baqu02020
Two-component system
baqu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
baqu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6959_14480 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K6959_14480 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baqu03021
]
K6959_14480 (rpoN)
Transcription machinery [BR:
baqu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K6959_14480 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Sigma70_r4
Fe_dep_repress
HTH_23
HTH_11
RepL
TrmB
MarR_2
HTH_Tnp_ISL3
Sigma70_r4_2
HTH_IclR
HTH_Crp_2
GerE
HTH_21
3H
HTH_5
HTH_24
HTH_20
MarR
Motif
Other DBs
NCBI-ProteinID:
UAC47807
LinkDB
All DBs
Position
complement(2972521..2973855)
Genome browser
AA seq
444 aa
AA seq
DB search
MNLKVGLWQQQTLKLAMTQELTQAIALLQYSSQELTAFLENKALENPLIELNASNVKTMD
PRYDIVRKKNKKARKDETNWIEQIAGEKSVTLSEHLLSQLHLTSIDLYHRKIMIQLIQNL
DENGYLRATEGEISNRASVPIEMVEDTIKLLQQLEPAGIGARSLQECLLLQIKRSKEANK
LAEQIISDYFIPFAEKRWKVLAKELQVSLIDIQNVFDFVQTLNPKPGAIFHHEKAAYIIP
EVIIDWDGADFLVKVFDEAIPKISFNHDYYQQFSARQDHQVNRFLQEKSQDYQWILKSIQ
QRNETLIKVVMKIVEKQSEFFQNGQGKLKPMTMKEISEELDIHESTVSRAVREKYAQTPF
GTFELKSFFTSTIKTTLNENTSSAEVKNKISFIIEQEDKRKPLSDQRIADILKEQERMVV
SRRTIAKYREQLGIPSSSKRKRYE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaaagttggtttatggcaacaacaaacattaaagctagcaatgacacaagaa
cttacacaagcgatcgcccttttacagtattcgtctcaagagctgacggcttttttggaa
aataaagcactcgaaaatccccttattgaacttaatgctagtaatgttaaaacaatggac
cctcgttatgatattgttcgcaagaaaaataaaaaggcaagaaaagacgaaacgaattgg
attgaacaaattgctggggagaagtctgtaacacttagtgaacatttactatcccagtta
catttaacctctatcgatctttatcatagaaaaataatgatccagttaattcagaactta
gatgaaaacggttacttgcgggcaaccgaaggtgaaatatcgaatagagcttctgttccg
attgaaatggttgaagatactatcaaactgctgcagcagctagagccggctggaatagga
gcgcgaagtttgcaagagtgtttactgttacaaataaaaagatctaaagaggcaaataaa
ttagctgaacaaattatttctgactattttattccatttgctgaaaaaaggtggaaagtg
cttgcgaaagagcttcaagtaagtttaatcgacatccaaaatgtgtttgactttgtgcaa
acattaaatcctaagccgggagcgatttttcatcatgaaaaagcggcatatattattcct
gaagtgattattgattgggatggcgctgattttctagtaaaagtatttgatgaagctatc
cctaaaatttcctttaatcatgattattatcaacaattctcagctagacaggatcatcaa
gtaaaccgctttcttcaagaaaagtcgcaagattatcaatggattttaaaaagtatccaa
cagcgaaatgaaacattaataaaagtagtaatgaaaattgttgaaaaacagtctgaattt
tttcagaatggtcaaggaaagttaaaaccgatgacgatgaaagaaatatctgaggagctt
gatattcatgaatcaactgtcagtcgtgcggtaagggagaaatatgctcaaacaccgttc
ggcacatttgagcttaaatcgttttttacaagtacgattaaaacaactttaaatgaaaat
acgtcctcagccgaagtgaaaaataaaatttccttcatcatcgaacaagaagataaacga
aaaccgttatctgatcagcggattgctgacattttaaaggaacaggaaagaatggttgtt
tcaagacgaacaatcgcaaaataccgtgaacaacttggaattccttcatcctcaaaacgg
aaaagatatgaataa
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