Bacillus aquiflavi: K6959_17385
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Entry
K6959_17385 CDS
T08352
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
baqu
Bacillus aquiflavi
Pathway
baqu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
baqu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K6959_17385 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baqu03021
]
K6959_17385 (rpoC)
03400 DNA repair and recombination proteins [BR:
baqu03400
]
K6959_17385 (rpoC)
Enzymes [BR:
baqu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K6959_17385 (rpoC)
Transcription machinery [BR:
baqu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K6959_17385 (rpoC)
DNA repair and recombination proteins [BR:
baqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K6959_17385 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
UAC48271
LinkDB
All DBs
Position
3583777..3587379
Genome browser
AA seq
1200 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTESGDTTLEKKQLLSEKEYRAYREKYGNKFQASMGAEAIKKLLQ
DINLDKEVEMLKEELKSAQGQRRTRAIKRLEVLEAFRHSGNEPYWMILEVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLEEVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARVLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTMERENAVGEGMVFKDSDEALIAYQNGYVHLHTRIAIH
AGSLNNETFTEEQNNKLLLTTVGKIIFNEILPSTFPYINEPTKTNLRVKTPEKYFVEKGV
DVKAHIKEQPLVEPFKKKILGKIISEVFKRFQITETSKMLDRMKDLGFKYSTKAGITVGV
ADIVVLSEKEAILQEAQDKVDNVLKQFRRGLITEDERYDRVISIWSVAKDTIQTKLMKSL
DKLNPIFMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGLLVAALKDGTEVIETLE
ERLIGRYARKAIKHPETGATIVSENGLITEDIAKEITELNIEEVWIRSAFTCNTRHGVCK
KCYGRNLATGQEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVQELF
EARNPKGQSVISEIDGVVVDIHEGRDRQHEIVVQGEVETRTYNAPYTARLKVSVNDNIEA
GQELTEGSIDPKELLKIKDVSAVQEYLLKEVQKVYRMQGVEIGDKHIEVMVRQMLRKIRV
IDAGETDVLPGTLLDIHQFTDANEKALIEGKLPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMQRYRKAEPFIKDDEVIEDSFLIE
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtaaataattttgagtatatgaaaataggccttgcttcgccagataaaatt
cgttcttggtcttttggtgaagttaaaaagcctgaaacaattaactatcgtacattaaaa
cctgaaaaagacggtttgttttgtgaacgtatttttggtccgacaaaggattgggaatgt
cattgtggaaaatacaagcgtgttcgctacaaaggcgtagtttgtgatcgatgtggggtt
gaagtgacacgagctaaagtacgtcgggaacgaatgggtcatattgaactagcagcacct
gtatcccacatttggtattttaaagggattcctagtcgaatggggcttgttttagacatg
tctccgcgagcacttgaggaagtcatttactttgcttcatacgttgtgactgaatctgga
gatacgactcttgaaaagaagcagctcctatccgaaaaggaataccgtgcatatcgtgaa
aaatacggtaataaattccaagcttctatgggtgcagaggcgatcaaaaagcttcttcaa
gatattaacttagataaagaagttgagatgttgaaagaagaattaaagagtgcccaaggt
cagcgtcggactcgagcgattaaacgtttagaagtattggaagcttttcgtcactctgga
aacgagccttattggatgatcttagaagtccttcctgttatccctccagagcttcgtcca
atggttcagttagatggcggacgatttgcaacatctgatttaaatgatttatatcgaaga
gtcattaaccgtaataaccgtttaaagcgcttgttagatttaggtgcgccaagcattatc
gtccagaatgaaaaacggatgctgcaagaagcggttgatgcattaatagataatggtcgt
cgtggtcgaccagtaactggtcctggaaaccgaccattaaaatcactttcccatatgtta
aaagggaaacaaggacgtttccgtcaaaacctgctcggaaaacgtgtcgattactcgggc
cgttcggtaattgttgtaggtccgaatttaaaaatgtaccaatgcgggctaccgaaagaa
atggcacttgagctctttaagccttttgtcatgaaagagcttgtagaaaaagggttagcg
cataatattaaatctgcgaagcgaaaaatcgaacgtgttcaacctgaagtatgggacgtt
ttagaagaagtgataaaagagcatccggttcttcttaaccgagctccaacccttcataga
cttggtattcaagccttcgaaccaacacttgtcgaaggaagagcaattcgattacatccg
ctagtctgtacagcttataatgcagactttgatggggaccaaatggcagttcacgttccg
ctgtcagctgaagcccaagctgaggcgcgtgtgctaatgcttgcagcacaaaatattttg
aatccgaaagacggtaaacctgttgttacaccttctcaagatatggtattaggcaactac
taccttacaatggaacgggaaaatgctgttggagaaggaatggtctttaaagattcagac
gaagcattaatcgcttaccaaaatggctatgtacatttgcatacaagaatagctattcat
gcaggttcattgaataatgaaacgtttacggaagagcaaaacaataaactgttgctgact
actgtcggtaaaattatttttaatgaaatattaccgagcacatttccatacattaatgaa
cctactaaaacgaacttacgagttaaaacaccggagaaatattttgttgaaaaaggtgta
gatgtaaaagctcatataaaagagcagcctttagtagaaccatttaagaaaaaaattctt
ggtaaaattatttcagaagtattcaagcgattccaaattactgagacttcaaaaatgctt
gaccgaatgaaagatttagggtttaaatactcaacaaaggccggtattactgtaggtgta
gccgacattgtcgtgttatctgaaaaagaagcaatccttcaagaggctcaagacaaagta
gacaatgtattaaaacaattcagacgtggactcataactgaagatgagcggtatgaccga
gttatctctatatggagtgttgctaaagatacaattcaaacaaagcttatgaaatcttta
gataaactgaatccaattttcatgatgagtgattcaggtgcccgtggtaacgcctcaaac
tttacacaattggctggaatgcgtgggttgatggctaaccctgctggacggattattgaa
ttaccaatcaagtcaagtttccgagaaggcttaacggtgctagagtactttatttcaacg
catggtgcgcgtaaaggtcttgcggacacagcgttgaaaacagccgattctggttattta
actcgtcgtcttgtggatgtcgctcaagatgttatcgttcgtgaagatgactgcggaact
gatcgtggtctactagtagcggctttaaaggacggtacagaagttattgaaacattagaa
gagcgcttaatcggacgttatgctagaaaagcaattaagcatccagaaacaggagctacg
atcgtctcagaaaatggtctgattactgaagatattgcaaaagaaattactgaactgaat
attgaagaagtatggatccgctcagcgtttacatgtaacacaagacacggtgtctgtaaa
aaatgctacggtcgaaatttagctactggacaggaagtagaggttggagaagctgtaggt
attatcgcggcccaatcgattggagaaccaggaacacagttgacgatgcggacattccat
actggtggagttgcaggagacgatattacacaaggtttgccgcgtgttcaagaattattt
gaagcccgcaaccctaaaggacagtcagttatttccgaaatagatggtgtagttgtcgat
attcatgaaggacgtgaccgccagcatgaaatcgtcgtccaaggtgaagtggaaacgaga
acatataatgcaccttacactgctaggttaaaagtaagtgtgaatgataacatagaggcg
ggtcaagagttaacggaaggatctattgatccgaaagaactcttaaaaattaaagatgta
tcagctgtacaagagtacttgctgaaagaagtacaaaaagtttatagaatgcaaggggtt
gaaattggcgacaagcatattgaagtaatggtacgccaaatgcttcgtaaaatacgggta
attgatgctggagagactgatgttcttccaggaacactccttgatattcaccaattcact
gatgcaaatgaaaaggcgcttattgaaggaaagcttccagcaaccggacgcccagtttta
ttaggtattacgaaagcatctttagaaacggattctttcttatcagcagcctcgttccaa
gaaacaacaagggtattgactgatgctgcgattaaaggaaaacgagacgaattactcggt
ttgaaggagaatgtaataatcggtaagctagttccagcaggaacgggaatgcagcgttat
cgtaaagcagaaccttttataaaggacgatgaagtcatcgaggactcattcctcatcgag
tag
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integrated database retrieval system
