Bartonella sp. A1379B: BA1379B_000620
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Entry
BA1379B_000620 CDS
T05185
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bara
Bartonella sp. A1379B
Pathway
bara03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bara00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BA1379B_000620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bara03400
]
BA1379B_000620
Enzymes [BR:
bara01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BA1379B_000620
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BA1379B_000620
DNA repair and recombination proteins [BR:
bara03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BA1379B_000620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-ProteinID:
AQX17913
UniProt:
A0AAC9QL04
LinkDB
All DBs
Position
67435..68235
Genome browser
AA seq
266 aa
AA seq
DB search
MPELPEVETVRRGLDPFLTGAKIISVQLNRKNLRFPFPEAFSERLVGRTIIQLSRRAKYL
LFSFSSNETILSHLGMSGSWRIEGEFLSKEHSSISKLVEHDHCIINIRAKDDKIYRLTYN
DVRRFGFMLLTDTTKLYEHPFLRRLGVEPMNNTLSGAYLKKAFANKKTSLKTALLDQSIV
AGLGNIYVCEALWRSHLSPQRNAFTLALEDVHTLESTNFLAQNICNVITEAIASGGLLYV
IICMQIVHLDIFNTIFRFMDVKEKNV
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacttcctgaagtggaaacggttcgccgtgggcttgatccgtttttaactggt
gcaaaaattatatctgttcaacttaatcgtaaaaatttgcgttttccttttccagaagca
ttttctgagcgattagtaggcagaacgattatacaacttagtcgtcgcgcgaaatattta
ttattttctttttcaagcaatgaaacgattttgagtcatttaggtatgtcaggatcgtgg
cgtatagagggtgaatttttaagcaaggagcattcttctataagcaaattagttgagcat
gatcattgcattataaatattcgggcaaaagatgataaaatttatcgtcttacttataat
gatgttcgccgttttggttttatgcttttaacagatacaacaaagctttatgaacatcca
tttttaagaaggctaggggttgagcctatgaacaatacgctttctggtgcttatttaaaa
aaagcttttgctaataaaaaaacatctctgaaaacagctttgcttgatcaatctattgtt
gctggccttgggaatatttatgtttgtgaagcactttggcgtagccatttatcaccacag
cggaatgcatttacattggcgttagaagatgtacatacactagaatctacaaattttctt
gcacaaaatatatgtaatgtgattactgaagcaattgcttctgggggacttctttacgtg
attatatgcatgcagatagttcacttggatattttcaacaccatttttcggtttatggac
gtgaaggaaaagaatgtttga
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