Bartonella sp. A1379B: BA1379B_003210
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Entry
BA1379B_003210 CDS
T05185
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bara
Bartonella sp. A1379B
Pathway
bara03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bara00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BA1379B_003210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bara03019
]
BA1379B_003210
Enzymes [BR:
bara01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BA1379B_003210
Messenger RNA biogenesis [BR:
bara03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BA1379B_003210
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Utp25_C
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AQX18165
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Position
385971..387218
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AA seq
415 aa
AA seq
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MSVSEENVFTELGLSSILVKNLFSAGMNKPKFIQEKAIPVMLKGHDILGIAQTGSGKTLA
FSLPILNRILTLGDKRYPKTARALILVPTRELAIQIEEAISAVAKGTHLSTCLIVGGMSR
LIQIRRMAKGVDILIATPGRLMDLIRSKYVDLSQSRFFILDEADRMLDMGFISDVRQIAN
FLHEKCQTALFSATMSKEVNVLADNLLRKPVKIEVVSQGTTAAEITQVLYCVSTSEKKSI
LSKLLTNPALTSVIVFIRTKHGADSVARSLAKTGYSVATIHGNKSQNARQCALKNFREGL
VRVLVATDIAARGIDIPGISHVINYDLPDNAESYVHRVGRTGRNGASGDAITLFDEKIEQ
VRLCAIERLIRMKLKRKEIPLQFAPLPEKLSEPKIYKREGSKKHRLKGFKGRKKS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgtaagtgaagaaaatgtttttacagaactaggtttgtcctctattttagttaaa
aacctatttagtgctggtatgaataaacctaagtttattcaagagaaagctatcccagta
atgttaaaagggcatgatattttagggattgcacaaactggttctggaaaaacattggca
ttcagtttacctattttgaaccggattttaactttaggtgataagcgttatcctaaaact
gcgcgagccttaattttggttcctacgcgtgagcttgctattcagattgaggaagcaatt
agtgctgttgcaaaaggaactcatctttcaacatgtttgattgtagggggaatgtcacgc
ttgatacaaattagacggatggcaaagggtgttgatattttgatcgcaacacctggacgt
ttaatggatcttatccgtagtaaatatgttgatctttctcagtctcgtttttttattcta
gatgaggctgatcgtatgttagatatgggtttcattagtgatgtgcgacaaattgcaaac
tttttgcatgagaaatgtcaaacggcacttttttctgcgacaatgtcaaaagaagttaat
gtgcttgcagataatttacttaggaaaccagtaaaaatagaagttgtttctcaaggaacc
actgctgcggagattactcaagtactgtattgtgtttctacaagtgaaaaaaagagtatt
ttgagtaaacttttgacaaatcctgctttgacttcagttattgtatttatacgtactaag
catggagctgattctgttgcgcgtagtttagcaaaaacaggatattctgttgctacaatt
catggaaataaatcacaaaatgctcggcagtgtgcgttaaaaaattttcgtgaaggactg
gtaagagttctggttgcgactgatattgctgcacgtggtattgatatacctggaatcagc
catgttattaattatgatttgccagataacgctgaaagctatgtgcatcgcgttggtcgt
acgggacgtaatggtgcatctggtgatgctattacactttttgatgagaaaatagaacag
gtacgtttgtgtgctatagagcgtctgattcgtatgaaattaaaacgaaaagagattcct
ctgcagttcgcgccattgcctgaaaaactatctgaaccgaaaatttacaagcgagaaggt
agtaaaaaacatcgcttaaaaggatttaaaggtcggaaaaaatcttga
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