Bartonella sp. A1379B: BA1379B_009090
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Entry
BA1379B_009090 CDS
T05185
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bara
Bartonella sp. A1379B
Pathway
bara03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bara00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BA1379B_009090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bara03400
]
BA1379B_009090
DNA repair and recombination proteins [BR:
bara03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BA1379B_009090
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BA1379B_009090
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_19
AAA_30
DUF87
AAA_22
SWI2_SNF2
Microtub_bd
DUF6240
Motif
Other DBs
NCBI-ProteinID:
AQX18730
LinkDB
All DBs
Position
1053946..1056366
Genome browser
AA seq
806 aa
AA seq
DB search
MSHKKSKTTQKQINQRATDPFAVMKQCSKAKLHTVKSHNASFETINTKPSKNITKTNSVT
ATVEALSALIASGNPLFKNGALWTPHRPIRPEKSEGGIPFQIKTSFQPAGDQPIAIKSLV
EGIKRNERTQVLLGVTGSGKTYTMAKIIEKTQRPALILAPNKTLAAQLYGEFKNFFPNNA
VEYFVSYYDYYQPEAYVARSDTYIEKESSINEQIDRMRHAATRAVLERDDVIIIASVSCI
YGIGSVETYTAMTFQMQKGDKLDQQKLLTDLVSQQYQRQDINFVRGSFRVRGDTIEIFPA
HLEDRAWRISLFGDEIETITEFDPLTGQKTADLQSIKIYANSHYVTPRPTLNQAIKSIKM
ELVKRLDELNAAGRLLEAQRLEQRTIFDLEMLETTGSCSGIENYSRYLTGRKPGEPPPTL
FEYIPSHALVFIDESHVTIPQIGGMYRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDAM
RPQTIAVSATPGRWEIEQSQGIFVEQVIRPTGLIDPPTEIRPVKTQVDDAVNEIHQTIKK
GYRTLITVLTKRMAEDLTEYLHEQNIRVRYMHSDINTLERIEILQDLRLGTFDVLIGINL
LREGLDIPECGFVAIFDADKEGFLRSETSLIQMIGRAARNVESRVILYADTITGSIERAL
QETKRRRQKQIAYNKEHQITPTSIKKNIDDILSSVCENNHNVKISHFITQNNKVGNNLTN
HIQHLEKLMRKAANDLNFEEAAQFRDEIKRLQEIELAIADDSLVYNNKYSLDESIKSSLF
TKPNLDQMGPNTMDVGLLTKHKKEKR
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacaaaaaatcaaaaacaactcaaaaacaaatcaatcaaagagcaacagaccca
tttgcagttatgaagcagtgctctaaggccaaacttcatacagtgaaaagtcataatgct
tcatttgaaaccataaatactaaaccatctaaaaacataacaaaaacaaatagtgttaca
gcaacagttgaagctctttctgcactcattgcttcaggtaatcctctttttaaaaatggt
gcattatggacacctcatcgtcctattcgtcctgaaaaatcggaaggtggaattccattt
caaattaaaacatcctttcagcctgccggtgatcaacccattgcaatcaaatctttggtt
gaaggaattaagagaaatgaacgcactcaagtgcttttgggcgttaccggttcagggaaa
acatatacaatggccaaaatcattgaaaagacacaacgccctgctctcattttagcgcca
aacaaaactttagctgcacagctttatggggaattcaaaaacttttttcccaacaatgct
gttgaatattttgtttcttattatgactattatcaaccagaagcttatgttgcacgctca
gatacttatattgaaaaagaatcctctattaatgaacaaattgaccgcatgcgccacgca
gcaacacgcgctgtactagagcgcgatgatgtcattatcatcgcatctgtatcctgtatc
tatggaattggttcagtagaaacttatacagcaatgactttccaaatgcaaaaaggtgat
aaactcgatcagcagaaattactaactgatttagtttctcaacaatatcagcgacaagat
ataaactttgttcgtggctcttttcgtgttcgaggcgatacaattgagatttttcccgct
catcttgaagaccgtgcttggcgtatttcgttgtttggagatgaaattgaaacaattacc
gaatttgaccctttaacaggacaaaaaacagcagatcttcaatccattaaaatttatgct
aattcacattatgtaacaccacgacccacattaaatcaggcgataaaatcaatcaaaatg
gaattagtaaaacgcctcgatgaattaaatgcagctggtcgccttttggaagcgcaacgt
ttagaacaacgtacaatatttgatttagaaatgctagaaactactggatcttgctcagga
attgaaaactactcgcgctacctgacaggtagaaagccaggtgaaccacctccaactctg
tttgagtatattcctagccatgctcttgtttttattgatgagagtcatgtcacaattcct
caaatcggtggtatgtatcgaggtgatttccgacgaaaggctaccttagcagaatatggc
ttccgcttgccatcttgtatggacaatcgtcctttacgttttgaagaatgggatgcaatg
cgcccacaaactatcgctgtttcagctacacccggacgctgggaaatagaacaatcgcag
ggcatctttgtagagcaagtcattcgtcccacagggctgattgatccaccaacagaaata
cgcccagtgaaaacacaggtcgatgacgccgtcaacgaaattcaccaaacaatcaaaaaa
ggttatcgtacattaataacagttctcaccaaacgcatggcagaagatctgaccgaatat
ctccatgaacaaaatatccgtgtgcgttatatgcactctgatattaatacactagaacgt
attgaaatcctgcaagacctacgccttggtacttttgatgttttaattggtattaactta
cttcgagaaggtttagatattccagaatgtggttttgttgctatctttgacgctgataaa
gagggttttttacgttcagaaacctcacttattcaaatgattggacgagctgcacgtaat
gtagagagtcgggttattctttacgctgatacaattactggttctatcgagcgtgctttg
caagaaacgaaacgacgtcgacaaaaacaaatagcttataataaagagcatcaaattaca
ccgactagtattaaaaagaatattgatgatattctaagttcggtttgcgaaaataaccat
aatgtcaagatttctcattttatcacgcaaaataataaagttggcaacaatctaaccaac
catattcagcatctcgaaaaactcatgcgtaaagcagctaatgatctgaactttgaagaa
gctgctcaatttcgtgatgaaatcaaacgactacaagaaatagaattagccattgcagat
gattctttagtgtacaacaataaatattcccttgatgaatcgataaaatcaagtcttttc
acgaaaccaaatcttgatcaaatgggccctaataccatggatgttggtttattgacaaaa
cacaaaaaagaaaaaagataa
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