KEGG   Bartonella sp. A1379B: BA1379B_012360
Entry
BA1379B_012360    CDS       T05185                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
bara  Bartonella sp. A1379B
Pathway
bara03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bara00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BA1379B_012360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bara03021]
    BA1379B_012360
   03019 Messenger RNA biogenesis [BR:bara03019]
    BA1379B_012360
Transcription machinery [BR:bara03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BA1379B_012360
Messenger RNA biogenesis [BR:bara03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BA1379B_012360
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 OB_RNB AAA_22 NACHT S1CSD-TOTE-2 Spore_III_AA
Other DBs
NCBI-ProteinID: AQX19035
LinkDB
Position
complement(1399170..1400435)
AA seq 421 aa
MQEMKLQELKSKNPVELVSFAETLEVENASLMRKQELMFAILKKLTLQNVEIIGEGVVEV
LQDGFGFLRSADANYLPGPDDIYLSPTQIQNFSLKTGDTVEGPIRGPKEGERYFALLKVN
KINFEDPEKIRYKIHFDNLTPLYSNERFQMEVQNPTDKDMSSRVIDLISPLGKGQRGLIV
APPRTGKTVLLQNIAHSITTNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAI
RHVQVAEMVIEKAKRLVEYGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRTFPA
MDIIKSGTRKEDLLVARQDLHKIFVLRRILAPMSVTDALEFLIDKLKQTKNNSEFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcaggaaatgaaattacaagagctaaaaagtaaaaatccagttgaacttgtttctttt
gctgaaacattggaagttgaaaatgcttctttaatgcgcaaacaggaattaatgtttgct
attttaaaaaaacttactttacaaaatgtagaaattataggcgaaggtgttgttgaagtt
ttacaagacggatttggatttcttcgatctgctgatgctaattatcttccaggaccagat
gatatttacctttcaccaacacagatacaaaatttttcattaaaaacaggagataccgtc
gagggaccaatacgaggaccaaaggaaggagaaagatattttgccctccttaaagttaat
aaaattaattttgaagatcctgaaaaaattcgttacaaaattcattttgataatcttact
cctctttattcaaatgagcgttttcaaatggaagtgcaaaatcctacggataaagatatg
tcatcacgagtaattgatttgatatctcctctaggaaaagggcaaaggggattgattgtt
gcaccaccacgaacaggaaaaacagttttattacagaatattgctcattctattacaaca
aatcatcctgaatgttatcttattgttttattaatagatgaacgtccagaagaagttact
gatatgcaacgttctgtaaaaggggaagttgtttcttctacttttgatgaaccagcaata
cgtcacgtacaagtcgctgaaatggttattgagaaagctaaaagattagttgaatatgga
cgtgatgttgttattcttcttgattcaattacacgtcttggacgcgcatataatactgtt
gttccttcatcaggaaaggttttaacaggtggtgtggatgcaaatgccttacaacgtcct
aagcgtttttttggtgcagctcgtaatattgaagaaggaggatctttaactattatagca
acagctttaatagatacgggaagtcgcatggatgaagttatttttgaagagtttaagggg
actggtaactcagaaattgttcttgaccgtaaagttgctgataagcgtacttttccagct
atggatattattaaatcaggaacacgtaaagaagatcttttagtagctcgtcaagattta
cataagatttttgttcttcgtcgtatattagcacctatgagtgtaacagatgctcttgaa
tttttaattgataaattaaaacaaacaaaaaataatagcgaattttttgattcaatgaac
acgtaa

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