Bartonella sp. A1379B: BA1379B_012580
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Entry
BA1379B_012580 CDS
T05185
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bara
Bartonella sp. A1379B
Brite
KEGG Orthology (KO) [BR:
bara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bara03400
]
BA1379B_012580
Enzymes [BR:
bara01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BA1379B_012580
DNA repair and recombination proteins [BR:
bara03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BA1379B_012580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
NPHP3_N
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AQX19057
LinkDB
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Position
complement(1424569..1428027)
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AA seq
1152 aa
AA seq
DB search
MTLFSIPQTALDTQAKATDPTTSVWVSANAGSGKTHVLTERVIRLLLNGTPPARILCLTY
TNAAASVMQSRIFRTLSNWSGLDDKQLQTILSKLENKPVNTQKLANARQLFARALETPGG
LKIQTFHAFCESLLHQFPLEANIAGHFELLDDINRKKLLQQARRKLLIHRDAQLALKELF
KIISENTLNQLLYEATQKQHELSEFLPFIFSENGTEQFRAFFNLAPDDTNQRLLDKIQQI
AALPSYAIKYYQTHSTPKNKDIIEKFLQLATSSDETNIINLVSNIYFEKSGKPRDFSRLF
SKKSDEVWPFIEKEIEDKQNQLPLLLDKYQCVKLVTLNIAAFQLCDIYLKIYTDLKKANN
LLDFDDLIERTLYLLQHKGASQWVQYKLDRGIDHILLDEAQDTNPKQWQIIQLLAQEFFT
GHSQRTNTRTVFAVGDEKQSIYSFQGAVLENFAENGRIIQKKVKQVEQKFEKIQLNYSFR
STADVLKSVDLVFESPENYKGLSAEHVKTVHEPIRVHSPGDVIIWDAISKKTNEFPDDWL
STVDHLDTPQICLAEKIAETISNWLKNGEMLPAKKRLLRAGDIMVLVRKRDQFVPALSRA
LKLRHVPVAGADRLQLTTHISVRDLMALARFVLQPQDDLSLACVLKSPLFSLSENELYQL
AVQRTGSLWESLSTHSSSHAVFKIIFERLNTYRTLVDKMPVFEFYSYILNNDKGRQKIIA
RLGTEANEVLDAFIDHTLTIQKTGLPGLQAFLEILSINEPEIKRELDQNCEEVRIMTVHA
AKGLEGAVVFLVDPGSAIWHPQYAPHFLKCSLGDKQVFIWRPNAQHHTKHFDKVLSRLKE
RAEEEYKRLLYVGMTRAEDRLIICGYTNQKETPNTWLQLVKKALKPHAVPIKGPAEDITA
WRYCITSSCPAPVYQEISCETHQIFPPLPAFFHNKVPTESTLSKPLRPSVVGINDTKTEF
FPQKERFSISPVLGEKNTKKTFSIEYGNFIHQLLQHLPNYPPTKRQDYAQFYLNTKASHW
HKTQREKALHHIWTILDNPDLKPFFSNLSHAEVALMGIVKINGKEQMVSGQIDRLCITHN
SVFFADFKTGLSPENDTDIKQHHLLQMALYQKLLQTIYPDKNMHALLIYIKKAKIFKLLP
EKLDALLDEIIV
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgactcttttttctattcctcaaacagctcttgatacacaagcaaaagccacagatccg
acaacaagtgtatgggtttctgcgaatgcaggatctggaaaaacccatgttttaactgaa
cgtgtcatccgcttacttttaaatggaacacctccagcacgtattttatgtcttacctat
accaacgcagccgcttctgttatgcaatcgcgtatttttcgtacactatccaattggagt
gggcttgatgacaaacagcttcaaacaattttatcaaagcttgaaaataaacccgttaat
acacaaaaacttgccaatgcccgtcaattatttgcccgcgctcttgaaacaccaggcggc
ctaaaaattcaaacttttcatgcattttgtgaatctttattacatcaatttccactagaa
gcgaatattgctggccattttgaactgttagatgatataaatcggaaaaaattattacag
caagcccgtcgcaaacttttaatccatcgtgatgcacaattagcgttaaaagaattattt
aaaattatcagtgaaaatacactcaatcaattgctctatgaagcaactcaaaaacaacat
gaattatctgagttcttacctttcatcttctctgaaaatggaacagaacaattccgtgca
ttttttaatttagcaccggatgacacaaaccaacgactgctcgataaaattcaacaaatt
gcggcacttccttcttacgcaataaaatattatcaaacccatagcaccccaaaaaacaaa
gatataatcgagaaatttttacagttagcaacatcatctgatgaaacaaatatcatcaac
cttgtttcaaatatttattttgaaaaatcaggaaaaccacgtgatttttcgcgcttattt
tctaaaaaatcagacgaagtctggccttttatcgaaaaagaaatcgaagacaaacaaaat
cagcttcctcttcttttagacaaatatcaatgtgtcaaacttgttacacttaacatagca
gcttttcagctttgtgatatttatctcaaaatctatacggatttaaaaaaagccaataac
ctcttagattttgacgacctcattgaacgtactctctatttattgcagcataaaggtgca
agccagtgggtacaatataaactcgaccgtggaattgatcatattttactagatgaagca
caagataccaatcctaagcaatggcaaattattcaacttttagcgcaagagttttttaca
ggtcacagtcaacgtacaaatacacgtactgtttttgctgttggtgatgaaaaacaatct
atttattcttttcaaggagctgtactagaaaattttgctgaaaatggccgaataattcaa
aaaaaagttaaacaagttgaacaaaaatttgaaaaaatacaactcaattattcttttcgc
tctacagccgatgtccttaaaagcgttgatcttgtctttgaatcacccgaaaattacaaa
ggactttcagcagaacacgtaaagacagtccatgaacctatccgtgttcatagtccaggc
gatgttattatatgggatgccatctccaaaaaaacaaacgaatttcctgatgattggctc
tcaactgttgatcatctcgatacaccccaaatatgtttagcagaaaaaattgccgaaacc
atttctaattggttgaaaaatggtgaaatgctcccagcaaaaaaacgtttactgcgtgct
ggtgatattatggttttggttcgtaaacgtgatcaatttgttcctgccctttctcgtgca
ctcaaactccgtcatgtccctgtcgctggtgctgatcgtttacaattaacaacccatatt
agtgtgcgtgatttaatggcgcttgcccgttttgttttgcaaccgcaagatgatctttcc
ctggcttgtgttttaaaaagtccacttttttcgcttagtgaaaacgaactttatcaactt
gccgttcaacgtacaggctctctttgggaaagcctttcaactcattcttcatcgcatgcc
gtttttaaaattatttttgagcgtcttaacacatatcgaactttagttgataaaatgccc
gtttttgaattttatagttatattctcaacaacgataaaggacgacagaaaatcattgct
cgtttaggaactgaagcaaatgaagtcctcgatgcttttatagatcacacactcactatt
caaaaaactggattaccaggattacaagcctttttggaaatattgagtatcaatgaacca
gaaatcaagcgtgaacttgatcaaaattgtgaagaagtaagaattatgacggttcacgct
gcaaaagggcttgaaggagcagttgtctttttggtcgatccagggagtgcaatatggcat
ccgcaatatgcaccacactttcttaaatgctccttaggagataagcaagttttcatctgg
cgcccaaatgcacaacatcatacaaaacattttgacaaagtgctttcacgtttaaaagaa
cgtgccgaagaagaatataaacgtcttctttatgtgggtatgacacgcgccgaagatcga
cttattatttgtggttatacgaatcaaaaagaaaccccgaatacatggctgcaattagta
aagaaagctcttaaacctcatgctgttcctataaaaggtcctgcagaagatatcacagct
tggcgttattgcatcacctcttcctgtccagcaccagtgtatcaagaaatatcttgtgaa
actcaccaaatttttccacctttacctgcgttttttcataataaagtgcctacagaatca
accttatcaaaacctctaaggccctctgttgtgggaatcaatgataccaaaactgaattt
ttccctcagaaggaacgctttagcatctcacctgtcttaggagaaaaaaataccaagaaa
actttttctattgaatatggtaattttattcaccaattactgcaacatttgcccaattac
ccccctacaaaacgccaagattacgcgcaattctatttaaatacaaaagcttctcattgg
cataaaacccaaagagaaaaagcccttcatcatatttggacaatcttagataatccagac
cttaagccatttttttctaacctttcacatgctgaagttgcgctcatgggtatcgtaaaa
attaatggtaaagaacaaatggtttctggtcaaattgaccgtttatgtatcacccataat
agtgttttttttgccgatttcaaaactggtctttcaccagaaaatgataccgatattaag
caacatcatttattacaaatggcactttatcagaaattgttgcaaactatctatcctgat
aaaaatatgcatgctcttctcatttatataaaaaaagccaagatctttaaattgcttcct
gaaaaacttgacgcacttcttgatgaaatcatcgtataa
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