KEGG   Candidatus Bathyarchaeota archaeon BA2: AOA66_0107
Entry
AOA66_0107        CDS       T04066                                 
Symbol
csl4
Name
(GenBank) Exosome complex component Csl4
  KO
K07573  exosome complex component CSL4
Organism
barb  Candidatus Bathyarchaeota archaeon BA2
Pathway
barb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:barb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AOA66_0107 (csl4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:barb03019]
    AOA66_0107 (csl4)
Messenger RNA biogenesis [BR:barb03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     AOA66_0107 (csl4)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     AOA66_0107 (csl4)
SSDB
Motif
Pfam: ECR1_N Zn_ribbon_RPB9 HypA DUF5816 Zn_ribbon_Nudix C1_1 Cas12f1-like_TNB Zn_ribbon_IS1595
Other DBs
NCBI-ProteinID: KPV64574
UniProt: A0A0P9E0F7
LinkDB
AA seq 191 aa
MSRSERKSGQFVVPGDRLGVIEEFTSGPGTYVEHGTIYSKTTGRTLMDTLNKKVSVYPLV
QAVGVPRVGSVVSGQVLDVKSKVGVLRILNVGKRSLSGFFTGILHISDVSPSYVETMFSV
CKTGDIMRAKVISDKNRTFYLSTADKNLGVIYAFCSQCGHVMLLRRQRLECSRCGNIEER
KVTSDYGEGAM
NT seq 576 nt   +upstreamnt  +downstreamnt
atgagtcggtctgaaagaaaaagcgggcagttcgttgtgcccggagatcgtttaggcgtt
atcgaagaattcacatcgggtcccgggacatacgttgaacatgggaccatatactctaaa
actactggccgcacactgatggatacgctaaataaaaaggtctcggtttaccctctggtt
caagcagtgggtgttccacgagtaggaagcgtagtctccggtcaagttttagacgtgaaa
agcaaagtaggcgtgttgcgtatattaaacgtagggaagagatcgctttcaggctttttc
acaggcattttacacatctctgatgtgagtccaagctacgttgagaccatgtttagcgtg
tgcaaaacaggcgacatcatgcgagccaaggtgatcagcgacaaaaacaggacattctac
ttgtcaacggcagataaaaatttgggagttatctatgctttctgctcacagtgtggacat
gtcatgctattgagaagacaaaggctagaatgttccaggtgtgggaacattgaagagcgg
aaggtaacctcagattatggggagggggcaatgtaa

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