Candidatus Bathyarchaeota archaeon BA2: AOA66_0211
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Entry
AOA66_0211 CDS
T04066
Name
(GenBank) ssDNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
barb
Candidatus Bathyarchaeota archaeon BA2
Pathway
barb03410
Base excision repair
barb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
barb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AOA66_0211
03430 Mismatch repair
AOA66_0211
03440 Homologous recombination
AOA66_0211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
barb03400
]
AOA66_0211
DNA repair and recombination proteins [BR:
barb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AOA66_0211
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AOA66_0211
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AOA66_0211
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
DUF6291
DUF434
Motif
Other DBs
NCBI-ProteinID:
KPV64400
LinkDB
All DBs
AA seq
484 aa
AA seq
DB search
MPVKKEQIDALMKDASEAASLILKHVEKGDFIQIASHIDADGLAAAAIIGKSLLRLGGNF
RIRVLKWVDEKVVDEIAAEKSPLTIFTDFGSGYLDLLGEKLSNHSVIILDHHQSISETPS
NFIQVNPHLHGVDGSRDLSGAGVAYLVAKALDKNNIDLAYLAVMGALGDLQNKYEQRKLG
GVNENMVEDAVNAGYLKVETDLLFFGRETRPIHQALARTTNPFIPGISGEEDKSLAFLAS
LGIKPKRKDKWRALRDLSEEEKKKLFSALADYFVSKNFPSDVAFNLVGDVYTLTREEPWT
PLRDAREFTVLLNATGRMDKAGLGVAICMGDRAKCLDEASAVMEEYRRTITKYLSWVTEK
PERMEELNSIYVVHGEGFIDENVISPVSSILSTTLSKLEKPIIAYSVVSGEDMVKVSARG
LEPLINKGLNLGEVLRVAAEKHSGRGGGHDIAAGAQVPIKNVESFIKLVDELVKKQLEGK
QLES
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgtaaaaaaagaacagatcgacgcccttatgaaagacgcctccgaggcggcaagt
ctcatcttgaagcatgttgaaaagggcgattttattcaaatagcttctcatatagatgca
gacggcttggcagcggcggctatcataggaaaatccctgcttaggttgggaggaaacttt
cgcatcagagtgttaaagtgggtggatgagaaggtagttgatgaaatagccgcggaaaag
tctcccctaaccatattcaccgactttggaagcggctaccttgacctacttggcgaaaag
ctctctaaccatagcgtaatcatccttgaccatcatcagtccatcagtgaaactccttcg
aatttcatccaagtaaatcctcaccttcatggagtcgacgggtcccgtgaccttagcggg
gctggagtggcgtacctagttgccaaggctctagataaaaataacatagacttggcttac
ctcgctgtgatgggagccctaggagatctgcaaaataaatatgagcaacggaaattggga
ggggtcaacgaaaacatggtggaggatgcagtaaatgcgggttatctcaaagttgaaact
gacctcctatttttcggaagggaaacacgtccaattcatcaggcgctagcccgcactaca
aatccgtttatcccgggaataagtggagaggaagacaaaagtttagcatttcttgcaagt
ctaggaatcaaaccgaagcgcaaggataagtggcgcgctttgagagacctttcagaagag
gagaagaagaagcttttctccgccctagcagattacttcgtgtcaaagaattttccaagc
gatgtggcattcaatttggtcggggacgtttacacgcttacacgtgaagagccttggact
ccacttagggatgctcgggagtttacggttttgctcaacgctacagggcgaatggataaa
gctggtcttggcgtagccatctgcatgggagaccgggcgaagtgtctcgatgaagcaagc
gctgtgatggaggaatataggcgaaccataaccaaatatctaagctgggtgaccgaaaaa
cctgaacgcatggaagaattgaacagcatctatgtcgttcatggagaaggtttcatagac
gagaatgttattagtccagtttcctccatcctctcgacaaccctttccaaacttgaaaaa
cctatcattgcctattcagtggtctccggcgaagacatggttaaagtatccgcaaggggg
ttagagcccctaataaataaagggctgaaccttggagaagtcttacgtgttgcagcagaa
aaacactcaggtaggggaggaggacacgacatagctgccggagcccaagtgcccatcaaa
aacgtggaatctttcattaaactcgtggacgagcttgtcaaaaaacagttggaaggcaag
cagcttgaaagttaa
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