KEGG   Candidatus Bathyarchaeota archaeon BA2: AOA66_0263
Entry
AOA66_0263        CDS       T04066                                 
Name
(GenBank) Exosome complex component Rrp42
  KO
K12589  exosome complex component RRP42
Organism
barb  Candidatus Bathyarchaeota archaeon BA2
Pathway
barb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:barb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AOA66_0263
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:barb03019]
    AOA66_0263
Messenger RNA biogenesis [BR:barb03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     AOA66_0263
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     AOA66_0263
SSDB
Motif
Pfam: RNase_PH RNase_PH_C Mago-bind AbiEi_4
Other DBs
NCBI-ProteinID: KPV64303
UniProt: A0A0P9DVT5
LinkDB
AA seq 266 aa
MSSSPMVVRVKQKRIAELISSGKRLDGRGLTDYREVKLEVGVIERAEGSARVRLGKTEVM
VGTKIEVGQPFPDVPNQGVLTVNAELVPLASPTFEPGPPDENSIELARIVDRGIRESKAI
ELEKLCIEPGKKVFVVFIDIYVLNHDGNLIDASSIAALAALLNTKMFNYEVEGGEIKVKP
GYTPLPIKNHPIAVTFAKINDKLIVDPWLEEEQVMETRLTITMDKDGKICAMQKGGHGYF
TLQQILEAVKIAREKAEELRKLVVRG
NT seq 801 nt   +upstreamnt  +downstreamnt
atgagttcttcacccatggttgtacgcgtcaaacaaaaacggatagctgagctaatctcg
agcggaaagagacttgacggacgagggttaactgattatcgtgaagttaaattagaggtg
ggagtcattgagcgtgctgagggctctgctcgcgtgcgccttggcaaaactgaagtgatg
gttggaacgaaaatcgaagtcggccagccttttccagacgtacccaaccaaggcgtcctc
accgttaacgctgaactggtgcccttagcttcccctacctttgaaccaggaccgccagat
gaaaactcaatagaactagcgagaatcgttgacagaggaataagagagtcaaaggcaatt
gaactagaaaagctatgcatcgagccgggaaagaaggtcttcgtagtcttcattgacatt
tacgttcttaatcacgatggaaatctgatagacgcttcgtccatagcggccttagccgct
ttgttaaacacaaagatgttcaactatgaagttgaaggtggagaaattaaggtaaagccg
ggttacactcctcttccaatcaaaaaccatccaatagctgttacctttgccaagataaac
gacaagcttatagtggacccttggcttgaagaggaacaggtcatggaaactcggcttaca
ataaccatggacaaagacggaaagatttgtgcaatgcagaagggtggccacggctatttc
acgctacagcaaatcttggaagccgtaaagatagctcgagaaaaagctgaggagctgcga
aagcttgtggtgaggggctga

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