KEGG   Candidatus Bathyarchaeota archaeon BA2: AOA66_0941
Entry
AOA66_0941        CDS       T04066                                 
Symbol
lig_2
Name
(GenBank) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
barb  Candidatus Bathyarchaeota archaeon BA2
Pathway
barb03030  DNA replication
barb03410  Base excision repair
barb03420  Nucleotide excision repair
barb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:barb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AOA66_0941 (lig_2)
   03410 Base excision repair
    AOA66_0941 (lig_2)
   03420 Nucleotide excision repair
    AOA66_0941 (lig_2)
   03430 Mismatch repair
    AOA66_0941 (lig_2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:barb03032]
    AOA66_0941 (lig_2)
   03400 DNA repair and recombination proteins [BR:barb03400]
    AOA66_0941 (lig_2)
Enzymes [BR:barb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     AOA66_0941 (lig_2)
    6.5.1.6  DNA ligase (ATP or NAD+)
     AOA66_0941 (lig_2)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     AOA66_0941 (lig_2)
DNA replication proteins [BR:barb03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    AOA66_0941 (lig_2)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     AOA66_0941 (lig_2)
DNA repair and recombination proteins [BR:barb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     AOA66_0941 (lig_2)
   NER (nucleotide excision repair)
    Other NER factors
     AOA66_0941 (lig_2)
   MMR (mismatch excision repair)
    Other MMR factors
     AOA66_0941 (lig_2)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase DUF3574
Other DBs
NCBI-ProteinID: KPV63465
LinkDB
AA seq 562 aa
METEFRALAELCEKLEATSKRTLMVSLVAEFLKHLRDDEVEPAISMILGRAFPRWDQRTL
EVSWATMSGSIKRLTNVDWKDFTKAFSKTGDIGAATKIMFESSRIQRQATLFEKPVTILE
ARRSLEAIAETSGYGSRERKECLIETLLGEVTPLEAKYIVKIMIGEMRTGFHEGLMELAV
SKAFNVPHDVVQRASMLTGDIGEVAAIAKTRGREGISKLQFQVFRPIKPMLAQTAEDINE
ALKEHGGLTAFEHKLDGARVQIHKAMNKVRIYSRRLTDVTASFPEIVRLTREEVKASEAI
LEGEIIAVGKDGTPLPFQHFMRRFRRVHDIEEMVKRIPVELFLFDLIYIDGKSLIVDPYV
ERRKKLKEIAGNIPLTRQIITSSPREAERFLGEAINKGHEGLVAKKLDSPYTLGVRGKRW
FKIKLSLEPLDLVIVAAEYGYGRRHNWLSDYYLAARDSESGEFLVVGKTFKGLTDEEIKD
MTRRLEEAAIKEEHRRVVVPPKIVVEVAYNEVQKSPKYKCGMALRFARIMRIREDKSPEE
ADTIQKVRKIYEKQFEKKAIYR
NT seq 1689 nt   +upstreamnt  +downstreamnt
atggaaacagagttccgggctttggctgaactttgcgagaaactggaggctacatccaaa
cgcacattgatggtgagtcttgtagcagaatttctaaagcatttacgtgatgatgaagtg
gaacccgcgatatctatgattcttggccgcgcttttccaaggtgggatcaaagaactctt
gaggttagctgggcaaccatgagtggctcgattaaacgcttaaccaatgtggattggaag
gatttcacaaaggctttcagcaaaacaggcgatataggagcagccaccaagatcatgttt
gaatcaagcagaattcagagacaggctacgctttttgaaaagcccgtgacgattctcgag
gcgagacgcagcctagaagccatagctgaaaccagtggctatggttcaagagaaagaaag
gagtgccttatagaaactttgttgggtgaagtcacacctttagaggcgaaatacatagtc
aagataatgattggcgagatgaggacaggtttccacgagggactgatggaactcgcagtt
tcgaaggctttcaacgttcctcatgatgttgttcaaagggcaagcatgctaaccggagac
ataggagaagtcgcggcaatagccaaaactcgaggccgagaaggaatctcgaagcttcag
tttcaagttttcagacctataaagcctatgttagcccaaacagccgaggacataaatgag
gccctcaaagaacatggcggtttaaccgccttcgaacataagctggatggggcccgcgta
cagattcacaaagctatgaataaggttaggatttacagtcgcaggctaaccgatgtaact
gcgagcttccctgaaatcgtgcgactgactcgggaggaagttaaagccagtgaagctatt
ttggaaggtgagattattgcagttgggaaggatggcaccccgcttcccttccagcacttc
atgagaaggttccgaagggttcacgacatagaagagatggttaagagaattccagtcgag
cttttccttttcgacctcatatacattgacggcaaaagcctcatcgttgacccatacgtt
gagcgaagaaagaaactgaaggaaatcgcggggaacatacccctaactaggcaaataatt
accagcagtcctcgtgaagcagaacggttcctaggagaagccataaacaaaggccatgag
gggcttgtggccaaaaaattggacagtccctataccctaggagttcggggcaagcgctgg
ttcaaaatcaaattatcattggagcccttggacctagtcatagtcgcggctgagtacggg
tatggaagaaggcacaactggctttcagactattatctagcggctcgagactctgaaagc
ggggagttcctagtggttgggaagactttcaagggtctaaccgacgaagaaattaaagat
atgaccagaagactcgaagaagcggccatcaaagaggagcatcggagggttgttgtacct
cctaaaatagtggtggaagtggcctacaacgaagtccagaaaagcccaaaatacaagtgt
ggaatggctttacgctttgctcgaataatgcgaattcgggaagacaaaagcccagaagaa
gccgacaccattcaaaaggttaggaaaatttacgagaagcagtttgagaaaaaagcgatc
tacaggtga

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