Candidatus Bathyarchaeota archaeon BA1: AOA65_0724
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Entry
AOA65_0724 CDS
T04065
Symbol
lig_1
Name
(GenBank) DNA ligase
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
barc
Candidatus Bathyarchaeota archaeon BA1
Pathway
barc03030
DNA replication
barc03410
Base excision repair
barc03420
Nucleotide excision repair
barc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
barc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOA65_0724 (lig_1)
03410 Base excision repair
AOA65_0724 (lig_1)
03420 Nucleotide excision repair
AOA65_0724 (lig_1)
03430 Mismatch repair
AOA65_0724 (lig_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
barc03032
]
AOA65_0724 (lig_1)
03400 DNA repair and recombination proteins [BR:
barc03400
]
AOA65_0724 (lig_1)
Enzymes [BR:
barc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
AOA65_0724 (lig_1)
6.5.1.6 DNA ligase (ATP or NAD+)
AOA65_0724 (lig_1)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
AOA65_0724 (lig_1)
DNA replication proteins [BR:
barc03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
AOA65_0724 (lig_1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
AOA65_0724 (lig_1)
DNA repair and recombination proteins [BR:
barc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
AOA65_0724 (lig_1)
NER (nucleotide excision repair)
Other NER factors
AOA65_0724 (lig_1)
MMR (mismatch excision repair)
Other MMR factors
AOA65_0724 (lig_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
HEAT_GCN1
Motif
Other DBs
NCBI-ProteinID:
KPV64878
LinkDB
All DBs
AA seq
594 aa
AA seq
DB search
MAPKECGCHENVYVPCRRLHHHEAGGQPIKVECMQTEFRALAELCERLESTSKRTLMVDW
VADFLGRLRVDEVEPATSMILGRAFPKWDQRVLEVSWATLSGIIKRLTSVDWKAFSDAFG
KTGDIGAATKIVLEASRPRRQTTLFEKPLTILEVRRGLEAIAETTGYGSRERKERLIETL
LSGATPLETKYLVKIMIGEMRTGFHEGLMELAVSRAFGIPQDVVQTASMLTGDIGEVAMI
AKAQGGEGVSRLQFQVFRPVKPMMAQTAEDVNEALKEHGGETALEYKLDGARIQIHKSDD
KVRIYSRRLTDITESLPEVVWLVRGEVKAHEVILEGEVIAVGEDGSPLLFQHLMRRFRRV
HEIDMMIKQIPIELYLFDLIYLDGQSLITASYLERRRKLAEIAGNIPLTRHMITTSPNEA
ERFLMEAIDKGHEGLVAKKLDSPYTPGVRGKRWFKIKRTLEPLDLVIVAAEYGYGRRHDW
LSDYYLAARDTQTGELLIIGKTFKGLTDEEIIQMTQRLKESAIKEEHRRVTVIPGIVVEV
AYNEIQKSPKYKSKMALRFARITRIRDDKSPEEADTIQRVSEIYEKQFEKKAKY
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcacccaaagagtgcgggtgccatgaaaacgtttatgtcccatgcagaagactacat
caccacgaggcaggtggtcaacccataaaggtagagtgtatgcaaacagagtttcgagcc
ctcgctgagctctgcgagaggttagagtccacatccaaacgcacgttaatggttgattgg
gtagcggattttttgggaaggttgcgtgtggatgaggtggagcccgccacatccatgatc
ctcggtcgtgccttccccaagtgggaccagagggtgctggaggtgagctgggcgaccctg
agtggcatcatcaagcgcctaactagcgtggattggaaggccttctcggacgcctttggg
aaaacaggtgatattggagcagcgacaaaaatcgtgcttgaagctagtaggcctcggaga
cagaccaccctcttcgagaagccgttgacgatccttgaggtgaggcgcggcctcgaagcc
atagcagaaaccacgggttatgggtcgagggagcggaaggaacgcttgatagaaaccttg
ctgagcggggccacacccttggaaaccaaatacctcgtcaagatcatgatcggggagatg
aggactggatttcatgagggtttgatggagctcgctgtctccagggccttcggcatccct
caggatgttgttcagacggcaagcatgcttaccggcgacattggggaggtggccatgata
gccaaggctcagggtggagaaggcgtctcaaggcttcagtttcaggtcttcaggcccgtc
aagccaatgatggcccaaacagccgaggatgtgaacgaggccctcaaggagcatggtggg
gagaccgccctcgaatataagctggatggggcccgcatccaaatccataagtccgatgac
aaggtgaggatttacagtcgcaggctgaccgacataacggagagcttgcccgaggttgtt
tggttggttcgaggggaagttaaggcgcacgaggtcatcttggagggtgaggtcatagct
gttggggaggacggtagcccgctgctcttccagcatctcatgcggaggttccgaagggtc
catgagatcgatatgatgattaaacagattcccatcgagctatacctatttgacctcata
taccttgatggtcaaagcctcatcaccgcctcctaccttgagcggaggaggaaattggcg
gaaattgcgggcaatatacccttaacaaggcatatgatcaccaccagccccaatgaggca
gagcggttcctaatggaagccatcgataaagggcacgaggggctggtagccaagaaactg
gacagcccctacacgcctggagttcgaggcaagcgctggttcaaaatcaaaaggacttta
gagcccttagaccttgttatcgttgcagcggaatatgggtatgggagaaggcacgattgg
ctctccgactattacctggcggctcgggacacgcaaaccggggagctcctcataattggg
aagacgttcaaggggctcaccgacgaggagatcattcaaatgacccaacgactcaaggag
tcagccattaaagaagaacacagacgagtcacagtcatcccaggaatcgtggtggaagta
gcctacaatgaaatacagaaaagcccaaaatacaaatccaagatggcactgcgcttcgca
cgaataacccggatacgagacgataaaagcccagaagaagccgacaccatccaaagggtc
agtgaaatctacgaaaagcaatttgagaaaaaggcaaaatactaa
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