Candidatus Bathyarchaeota archaeon BA1: AOA65_1804
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Entry
AOA65_1804 CDS
T04065
Symbol
tfb
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
barc
Candidatus Bathyarchaeota archaeon BA1
Pathway
barc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
barc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AOA65_1804 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
barc03021
]
AOA65_1804 (tfb)
Transcription machinery [BR:
barc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
AOA65_1804 (tfb)
Prokaryotic type
Archaeal type
TFB
AOA65_1804 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Lar_restr_allev
Sigma70_r4
Cyclin_N
Auto_anti-p27
Ribosomal_L32p
BRF2-like_C_cyclin_rpt
Zn_ribbon_LysW
Ribosomal_S27e
Cas12f1-like_TNB
HTH_Tnp_ISL3
DZR
Cyclin_C
Motif
Other DBs
NCBI-ProteinID:
KPV62489
LinkDB
All DBs
AA seq
313 aa
AA seq
DB search
MSDEEDVLTSPLKVQRCPECGSTRLMRDYELAEIVCMSCGFVVAAKLTDRGPEWRAFDDE
QRAKRTRVGAPLTFTIHDKGLSTMIDWHDRDIYGKRLTPGQRAQIYRLRKWQRRIRVSDA
TERNLAFALSEISKIANNLNLPKNILETASVIYRKAVKEHLIRGRSIQGVTAAAIYVACR
QCGLARTLEEIAIASSINKKEVGRSYRFLIKELDYFIPPLTPSQYITKFSNQLTMQGKVE
EIAHKILTTARDLKLTSGRGPTGIAAAASYIASMLIGERKTQREIAEIAQVTEVTIRNRY
KELADRLMFVVTL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgaagaagatgtcctaacgagccctttaaaggtccagcggtgtccagaatgc
gggagcacacgtctcatgcgggattatgagttagccgagatcgtatgcatgagttgtggt
tttgtcgtcgccgccaaactcacagatcgtggaccggaatggcgtgcgtttgatgatgaa
cagcgggccaaacgaacccgtgttggtgctcctctcacttttaccattcatgataaaggg
ctctccaccatgatcgattggcatgaccgcgacatctacggtaagaggcttactccaggg
cagagggctcagatctatcggcttcgaaagtggcagcgtcgcatccgtgtctccgacgcc
acggagcgaaatctcgctttcgccctatccgaaatctctaagatagccaacaacctaaac
ctccccaaaaacatcctggaaacagcctctgtcatctatcgaaaggccgtgaaggagcac
ctcatccgggggaggtccatacagggtgtgaccgccgccgccatatacgtggcttgtcga
cagtgcggactcgcacgaaccctcgaggaaatcgccatagcctcaagcatcaacaaaaag
gaggtggggcgcagctatcggttcctcatcaaggagcttgactatttcatcccacccctg
acacccagccaatacatcaccaaattctccaatcagctcaccatgcaagggaaggtggag
gagattgcccacaagatcctcaccaccgcgagggaccttaaactcacatcgggtaggggt
ccaactggcatagctgcggccgccagctacatcgcctctatgctcataggtgaaaggaaa
actcagagggaaatcgctgaaatcgctcaagtaactgaagtcacgattcggaatcgctac
aaggagttggctgatcgtctcatgttcgttgtcaccctttaa
DBGET
integrated database retrieval system
