KEGG   Candidatus Bathyarchaeota archaeon BA1: AOA65_2293
Entry
AOA65_2293        CDS       T04065                                 
Symbol
csl4
Name
(GenBank) Exosome complex component Csl4
  KO
K07573  exosome complex component CSL4
Organism
barc  Candidatus Bathyarchaeota archaeon BA1
Pathway
barc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:barc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AOA65_2293 (csl4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:barc03019]
    AOA65_2293 (csl4)
Messenger RNA biogenesis [BR:barc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     AOA65_2293 (csl4)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     AOA65_2293 (csl4)
SSDB
Motif
Pfam: ECR1_N EXOSC1 Zn_ribbon_RPB9 ECR1_N_2 Zn_ribbon_TiaS HypA Zn_ribbon_Nudix RYYR-CCHC Cas12f1-like_TNB DZR Zn_Tnp_IS91 DUF7129 RRP4_S1 FYVE C1_1
Other DBs
NCBI-ProteinID: KPV61476
UniProt: A0A0P9DZM9
LinkDB
AA seq 191 aa
MSPAKRESGQIVVPGDRLGVIEEFIPGPGTYVEHGAIHSKFTGYILLDMPDRRVSVYPLT
HALGTPRVGSIVIGQVMDVQSKTATLRISKVGKRLTSGFFTCILHISDVGPGYVESMFDV
VKTGDIMRAKVVSDKNRIYHLSTAEKDLGVIYAFCSQCGNMLTSKGRRMECTKCGKIENR
RTASDYGREVV
NT seq 576 nt   +upstreamnt  +downstreamnt
gtgagtccagctaagagggagagtgggcagattgttgttccgggagatcgattgggcgtg
attgaggaattcatacctggtcccggaacgtacgtcgaacatggggcgatacattctaag
tttactggatacatccttctagacatgccagataggagggtttcggtgtatcccctgacc
cacgctttgggcactcctcgagtaggaagtatcgtgatcggtcaagtgatggatgtgcag
agcaaaacagccacgttgcgtatatcaaaagtgggaaaaagattgacctcgggttttttc
acatgcatcctacatatctctgacgtaggcccaggctacgttgaatcaatgtttgatgta
gtcaaaacgggcgacatcatgcgagccaaggtagtcagcgataaaaacagaatataccac
ttgtcaactgcggagaaggacttaggggttatctacgctttttgctcccaatgtggaaat
atgctaacttcaaaagggcgaagaatggaatgcaccaagtgcggcaaaattgaaaaccga
agaaccgcctccgattatgggagggaagtggtatag

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