Candidatus Bathyarchaeota archaeon BA1: AOA65_2386
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Entry
AOA65_2386 CDS
T04065
Symbol
rpa_2
Name
(GenBank) Replication factor A
KO
K07466
replication factor A1
Organism
barc
Candidatus Bathyarchaeota archaeon BA1
Pathway
barc03030
DNA replication
barc03420
Nucleotide excision repair
barc03430
Mismatch repair
barc03440
Homologous recombination
barc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
barc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOA65_2386 (rpa_2)
03420 Nucleotide excision repair
AOA65_2386 (rpa_2)
03430 Mismatch repair
AOA65_2386 (rpa_2)
03440 Homologous recombination
AOA65_2386 (rpa_2)
03460 Fanconi anemia pathway
AOA65_2386 (rpa_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
barc03000
]
AOA65_2386 (rpa_2)
03032 DNA replication proteins [BR:
barc03032
]
AOA65_2386 (rpa_2)
03400 DNA repair and recombination proteins [BR:
barc03400
]
AOA65_2386 (rpa_2)
Transcription factors [BR:
barc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
AOA65_2386 (rpa_2)
DNA replication proteins [BR:
barc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
AOA65_2386 (rpa_2)
DNA repair and recombination proteins [BR:
barc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
AOA65_2386 (rpa_2)
MMR (mismatch excision repair)
AOA65_2386 (rpa_2)
DSBR (double strand breaks repair)
HR (homologous recombination)
AOA65_2386 (rpa_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
REPA_OB_2
SHLD2_OB1
KOW6_SPT51-2
BRCA-2_OB1
DUF2240
Motif
Other DBs
NCBI-ProteinID:
KPV61569
UniProt:
A0A0P9DN74
LinkDB
All DBs
AA seq
519 aa
AA seq
DB search
MSIEEIIQRILSSRKDLTREEVLRRIEDKKEMARGYFTDETSARIVASELGVEISLKTFR
PEVSIQDLVSGLNDVTLTGRVIIIYPLQTFTRPDATGGRVARLLIADKSGTLKVVLWDDK
VGLVETGGIERGQIVRVSHGYVREGLDGKLELHVGLRGDIQVSPPDTVESKYPPIAQFIE
KIAKVTRKHGKVSIVGVVREVHPTFEFERPDGTSGKVMRLRLRDESGEITAVLWNEKVDE
LGGVKMGDHLQIENARVKERLDGQLEVHVESATHIETLAETSPTLAPTPAAIAPFTKIRD
LGLGMRGVDVLARVMHVEEVREFRRSNGEVGHVSALLIKDETGSVRLSLWEDKAVLSRQI
RLGDIVLARGSYTRERFGEVNLNLGRQGSLTINPKIAEAERIPPLEEERTSIAGIKGEGG
PITIEGTIITTPVTREVVTSQEQRVTVASFDLTDETGKIRASIWRGLAEAVRDLTIGTRI
KIKNAYVKKGFSDQLELTSRKPTFIEVLSKSAKPPTPEE
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgaggagattattcagcgaatactgtcatctcgaaaagatctcacgcgtgaa
gaggttctgaggaggattgaagataaaaaggagatggcaaggggatatttcacggatgaa
acctctgcccgcattgttgcttcagagttgggggtggagatttcgctgaagaccttccga
cccgaggtttcgattcaagacctcgtctctggtttaaacgatgtaacacttactgggcgt
gtcatcatcatctatccccttcaaaccttcacccgcccggatgcaacggggggaagggtt
gcgcgtttactgattgcagataagagtggaacgctgaaggtagtcctctgggatgacaaa
gtaggccttgtggaaacaggggggattgagcgggggcaaatcgttagggtttcgcatggg
tatgtgcgggaggggttagacggaaaacttgagctgcatgtggggctgcgtggcgatatt
caggtttccccaccagacaccgtcgaaagcaaatacccccccatcgcacaattcatagaa
aagatagcgaaggtaacccgaaagcacgggaaagtgagtatagtcggggttgtgcgggag
gtccacccgaccttcgaattcgagagaccagacggaaccagtggtaaggtgatgagacta
aggttgagggatgaatcgggtgaaataacagcggtgctttggaatgaaaaggtggacgaa
ttgggcggggtgaaaatgggagaccatctacaaatcgagaacgccagggtgaaagagcgc
ctcgatggtcaactcgaggtccacgtggagagtgcaacccacattgaaaccctcgctgaa
acatcaccaacccttgcacccacaccagccgccattgcaccatttacaaaaataagggac
ctgggcctgggcatgcgaggcgtcgacgttttagcgagagtcatgcatgtggaggaggtt
agggagtttaggcgatcaaacggcgaggtgggacatgtctctgccctcttaataaaggac
gaaacgggttcggttcgactcagtctctgggaggataaagcggttctatctagacagatc
aggcttggagacatcgtgttagccagggggtcatacacacgggagcgattcggagaagta
aacctcaaccttgggagacagggatccctaacaataaacccgaagatagctgaggcggaa
agaatcccaccacttgaggaagaaagaacaagtatagctgggattaaaggggagggaggt
cccatcaccatagaaggaactatcataacaacccctgtgacgagggaggttgtcacatcc
caagagcaaagggtcactgttgcctcttttgacttaactgatgaaactggaaaaatcaga
gcgtcaatatggagagggctggcggaagctgtaagggatttgaccattggaacacggatc
aaaatcaaaaatgcgtacgttaaaaagggtttttcggatcagttggaacttacctcacgt
aagccaacgttcatagaggttttatcgaaatcggcaaagccgcccaccccagaggagtag
DBGET
integrated database retrieval system
