KEGG   Bacillus arachidis: QRY57_14270
Entry
QRY57_14270       CDS       T09337                                 
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
bard  Bacillus arachidis
Pathway
bard03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bard00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QRY57_14270 (recQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bard03019]
    QRY57_14270 (recQ)
   03400 DNA repair and recombination proteins [BR:bard03400]
    QRY57_14270 (recQ)
Enzymes [BR:bard01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     QRY57_14270 (recQ)
Messenger RNA biogenesis [BR:bard03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     QRY57_14270 (recQ)
DNA repair and recombination proteins [BR:bard03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      QRY57_14270 (recQ)
SSDB
Motif
Pfam: RQC DEAD HTH_40 Helicase_C HRDC RecQ_Zn_bind ResIII HTH_45 HTH_35
Other DBs
NCBI-ProteinID: WIY59081
LinkDB
Position
complement(2477040..2479157)
AA seq 705 aa
MFTKAQELLASYFGYTSFRRGQDETIKNVLDGKDTVCIMPTGGGKSICYQIPALVFEGTT
LVISPLISLMKDQVDTLVQNGISATYINSSISITEANQRIQLAKQGHYKLLYVAPERLDS
MEFVDQLIDMKIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQ
VREDICRALEIDQKNTIMTTFERENLSFSVIKGQDRNAYLADYIRQNKKESGIIYAATRK
VVDQLYEDLYKAGVSVARYHAGMNDHDRNGQQERFLRDEVSVMVATSAFGMGIDKSNIRY
VIHYQLPKNMESYYQEAGRAGRDGLDSECILLYSSQDVQVQRFLIDQSTGESRFSNELEK
LQYMTDYCHTEQCLQSFILEYFGEEPKEDCGRCGNCTDERESVDVTRESQMVLSCMIRTN
QRFGKQMIAQVLTGSKNKKVVEFNFHTLPTYGLLSNRSVKEVSEFIEFLISEELIAVEHG
TYPTLKVTEKGKEVLLGNENVLRKERVATRQIVQDHPLFEILREVRKEIAQGEGVPPFVI
FSDQTLKDMCAKMPQSDPELLQVKGIGEHKLAKYGSHFLQAVIHFIEENPDYADTIKTEV
VTERKKPGKSSTNSHLETYEMYKQGTELSIIAKERGLSSQTVENHLIRCYEEGMEVDWHS
FVPAEYESLIETAMQHAEGGLKSIKELLPAEVSYFMIRAYLQIRK
NT seq 2118 nt   +upstreamnt  +downstreamnt
ttgtttacaaaagcacaagaacttttagcgtcctattttggttacacgtcattccgcaga
gggcaagatgagacaattaaaaatgtattggatggaaaagataccgtttgtattatgcca
acaggcggtggtaaatcgatttgttatcaaattccggcattagtatttgaggggacgaca
ttagttatatcgccgcttatttcacttatgaaggaccaagtagatacgttagtacaaaat
ggaatttcagctacatacattaatagttctatttcaattacagaagcaaaccaacgaatc
caattagcgaaacaaggtcattataagttgctatatgtggcgccagagcgtctagattca
atggaatttgtggatcaattaattgatatgaagataccgatgattgcaattgacgaagca
cactgtatttcgcagtggggacatgatttccgcccaagttatttacatatacatcgtata
ttagactatcttccagaaaagccgcttgtattagcgttaactgcgactgcaacaccgcaa
gtgcgagaagatatttgtcgcgcgctagaaattgatcaaaaaaatacaattatgacaacg
tttgaacgggaaaatttatcgttctcagtaatcaagggacaggatcgaaatgcatattta
gcggactatattcgtcaaaataaaaaggaatctggaattatttatgcagcgacaagaaaa
gttgttgatcagttgtatgaagatttatataaagcaggggtttcagttgctcgttatcat
gccggaatgaatgatcatgatcgtaacggacagcaagagcgatttttacgtgatgaagtg
agcgtaatggtagcgacatctgcatttggtatggggatcgataaatcaaacattcgttat
gttattcattatcaactcccgaagaatatggaaagttattatcaagaagcaggacgtgct
ggccgtgacggattagatagtgaatgtattttgttatattcttctcaggatgtacaagta
cagcgctttttaattgatcaatccactggagaatcacgtttctcaaatgaacttgaaaaa
ttgcagtatatgacagattactgccatacagaacaatgtttacaatcatttattctagag
tactttggtgaagaaccaaaagaagattgtggacgctgtgggaattgtacagatgaacgt
gagagcgtcgacgttacgagagaatcacaaatggttttatcatgtatgattcgaacaaac
cagcgatttggaaagcaaatgattgcacaagtactgaccggatcaaaaaataaaaaagta
gttgaattcaatttccatacattacctacttatggtcttttatcgaatcgtagcgtaaaa
gaagtaagtgagtttattgagtttttaatttcagaagaattaattgcggtggaacacggg
acgtatccaaccttaaaggtaacagaaaaagggaaagaagtattgcttgggaatgaaaat
gtgttacgtaaagaaagagtggcaacaagacaaattgtacaggatcatccattgtttgag
atattacgtgaagttcggaaagaaatcgcgcaaggggaaggcgtaccaccatttgttatc
ttctctgatcaaacgctaaaagatatgtgtgcgaaaatgccacaaagcgatccagaactt
ttacaagttaaagggattggagaacataaacttgcgaagtatggttcgcactttttacaa
gcagtcattcattttattgaagaaaatccagattacgcggatacgattaagacagaagtt
gttacggaacgcaagaaacctggaaaatcatcgacaaattctcacttagaaacgtatgaa
atgtataaacaaggaacggagttaagtataatcgcaaaagaacgaggcttatcaagtcaa
actgtcgaaaatcacttaattcgctgttatgaagaaggaatggaagtggattggcatagt
ttcgttccagcagaatatgaatctcttattgaaacagcaatgcaacatgcagaaggcgga
ttaaagtcgattaaagaactgcttcctgctgaagtgagttactttatgattcgtgcttat
ttacaaataagaaaatag

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